Gene : Tp57577_TGAC_v2_gene34579 T. pratense v2
Defline:  (1 of 2) PTHR10336:SF105 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 1-RELATED Genomic Order:  11
Name:  ? Tp57577_TGAC_v2_gene34579 Secondary Identifier:  ? PAC:35968097
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPASYN-PWY Trifolium pratense pathologic  
Tpratense PWY-6351 Trifolium pratense pathologic  
Tpratense PWY-6367 Trifolium pratense pathologic  
Tpratense PWY-7039 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene34579 0.5kb upstream 0.5kb upstream 7222 true Tp57577_TGAC_v2_scaf_612: 71304-78525 Trifolium pratense
Tp57577_TGAC_v2_gene34579 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_612: 78026-78525 Trifolium pratense
Tp57577_TGAC_v2_gene34579 0.5kb downstream 0.5kb downstream 7222 true Tp57577_TGAC_v2_scaf_612: 70804-78025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_612: 70804-71303 Trifolium pratense
Tp57577_TGAC_v2_gene34579 1.0kb upstream 1.0kb upstream 7722 true Tp57577_TGAC_v2_scaf_612: 71304-79025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_612: 78026-79025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 1.0kb downstream 1.0kb downstream 7722 true Tp57577_TGAC_v2_scaf_612: 70304-78025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_612: 70304-71303 Trifolium pratense
Tp57577_TGAC_v2_gene34579 2.0kb upstream 2.0kb upstream 8722 true Tp57577_TGAC_v2_scaf_612: 71304-80025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_612: 78026-80025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 2.0kb downstream 2.0kb downstream 8722 true Tp57577_TGAC_v2_scaf_612: 69304-78025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_612: 69304-71303 Trifolium pratense
Tp57577_TGAC_v2_gene34579 5.0kb upstream 5.0kb upstream 11722 true Tp57577_TGAC_v2_scaf_612: 71304-83025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_612: 78026-83025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 5.0kb downstream 5.0kb downstream 11722 true Tp57577_TGAC_v2_scaf_612: 66304-78025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_612: 66304-71303 Trifolium pratense
Tp57577_TGAC_v2_gene34579 10.0kb upstream 10.0kb upstream 16722 true Tp57577_TGAC_v2_scaf_612: 71304-88025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_612: 78026-88025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 10.0kb downstream 10.0kb downstream 16722 true Tp57577_TGAC_v2_scaf_612: 61304-78025 Trifolium pratense
Tp57577_TGAC_v2_gene34579 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_612: 61304-71303 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792751 5273 Angiosperm View MSA
122313198 5265 Fabidae View MSA
124071681 5270 Rosid View MSA
123628037 5271 Pentapetalae View MSA
122798488 5272 Eudicot View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain