Gene : Tp57577_TGAC_v2_gene25463 T. pratense v2
Defline:  (1 of 12) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  27
Name:  ? Tp57577_TGAC_v2_gene25463 Secondary Identifier:  ? PAC:35968034
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25463 0.5kb upstream 0.5kb upstream 6807 true Tp57577_TGAC_v2_scaf_162: 237396-244202 Trifolium pratense
Tp57577_TGAC_v2_gene25463 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_162: 237396-237895 Trifolium pratense
Tp57577_TGAC_v2_gene25463 0.5kb downstream 0.5kb downstream 6807 true Tp57577_TGAC_v2_scaf_162: 237896-244702 Trifolium pratense
Tp57577_TGAC_v2_gene25463 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_162: 244203-244702 Trifolium pratense
Tp57577_TGAC_v2_gene25463 1.0kb upstream 1.0kb upstream 7307 true Tp57577_TGAC_v2_scaf_162: 236896-244202 Trifolium pratense
Tp57577_TGAC_v2_gene25463 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_162: 236896-237895 Trifolium pratense
Tp57577_TGAC_v2_gene25463 1.0kb downstream 1.0kb downstream 7307 true Tp57577_TGAC_v2_scaf_162: 237896-245202 Trifolium pratense
Tp57577_TGAC_v2_gene25463 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_162: 244203-245202 Trifolium pratense
Tp57577_TGAC_v2_gene25463 2.0kb upstream 2.0kb upstream 8307 true Tp57577_TGAC_v2_scaf_162: 235896-244202 Trifolium pratense
Tp57577_TGAC_v2_gene25463 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_162: 235896-237895 Trifolium pratense
Tp57577_TGAC_v2_gene25463 2.0kb downstream 2.0kb downstream 8307 true Tp57577_TGAC_v2_scaf_162: 237896-246202 Trifolium pratense
Tp57577_TGAC_v2_gene25463 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_162: 244203-246202 Trifolium pratense
Tp57577_TGAC_v2_gene25463 5.0kb upstream 5.0kb upstream 11307 true Tp57577_TGAC_v2_scaf_162: 232896-244202 Trifolium pratense
Tp57577_TGAC_v2_gene25463 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_162: 232896-237895 Trifolium pratense
Tp57577_TGAC_v2_gene25463 5.0kb downstream 5.0kb downstream 11307 true Tp57577_TGAC_v2_scaf_162: 237896-249202 Trifolium pratense
Tp57577_TGAC_v2_gene25463 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_162: 244203-249202 Trifolium pratense
Tp57577_TGAC_v2_gene25463 10.0kb upstream 10.0kb upstream 16307 true Tp57577_TGAC_v2_scaf_162: 227896-244202 Trifolium pratense
Tp57577_TGAC_v2_gene25463 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_162: 227896-237895 Trifolium pratense
Tp57577_TGAC_v2_gene25463 10.0kb downstream 10.0kb downstream 16307 true Tp57577_TGAC_v2_scaf_162: 237896-254202 Trifolium pratense
Tp57577_TGAC_v2_gene25463 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_162: 244203-254202 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309356 5265 Fabidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain