Gene : Tp57577_TGAC_v2_gene25461 T. pratense v2
Defline:  (1 of 1) K18677 - galacturonokinase (GALAK) Genomic Order:  21
Name:  ? Tp57577_TGAC_v2_gene25461 Secondary Identifier:  ? PAC:35968058
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-4 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25461 0.5kb upstream 0.5kb upstream 19280 true Tp57577_TGAC_v2_scaf_162: 172376-191655 Trifolium pratense
Tp57577_TGAC_v2_gene25461 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_162: 191156-191655 Trifolium pratense
Tp57577_TGAC_v2_gene25461 0.5kb downstream 0.5kb downstream 19280 true Tp57577_TGAC_v2_scaf_162: 171876-191155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_162: 171876-172375 Trifolium pratense
Tp57577_TGAC_v2_gene25461 1.0kb upstream 1.0kb upstream 19780 true Tp57577_TGAC_v2_scaf_162: 172376-192155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_162: 191156-192155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 1.0kb downstream 1.0kb downstream 19780 true Tp57577_TGAC_v2_scaf_162: 171376-191155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_162: 171376-172375 Trifolium pratense
Tp57577_TGAC_v2_gene25461 2.0kb upstream 2.0kb upstream 20780 true Tp57577_TGAC_v2_scaf_162: 172376-193155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_162: 191156-193155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 2.0kb downstream 2.0kb downstream 20780 true Tp57577_TGAC_v2_scaf_162: 170376-191155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_162: 170376-172375 Trifolium pratense
Tp57577_TGAC_v2_gene25461 5.0kb upstream 5.0kb upstream 23780 true Tp57577_TGAC_v2_scaf_162: 172376-196155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_162: 191156-196155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 5.0kb downstream 5.0kb downstream 23780 true Tp57577_TGAC_v2_scaf_162: 167376-191155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_162: 167376-172375 Trifolium pratense
Tp57577_TGAC_v2_gene25461 10.0kb upstream 10.0kb upstream 28780 true Tp57577_TGAC_v2_scaf_162: 172376-201155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_162: 191156-201155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 10.0kb downstream 10.0kb downstream 28780 true Tp57577_TGAC_v2_scaf_162: 162376-191155 Trifolium pratense
Tp57577_TGAC_v2_gene25461 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_162: 162376-172375 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305467 5265 Fabidae View MSA
124050204 5270 Rosid View MSA
123740556 5271 Pentapetalae View MSA
122789142 5272 Eudicot View MSA
122041803 5273 Angiosperm View MSA
121344936 5274 Embryophyte View MSA
123425309 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain