Gene : Tp57577_TGAC_v2_gene4288 T. pratense v2
Defline:  (1 of 2) K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Genomic Order:  12
Name:  ? Tp57577_TGAC_v2_gene4288 Secondary Identifier:  ? PAC:35960567
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4288 0.5kb upstream 0.5kb upstream 6424 true Tp57577_TGAC_v2_scaf_34: 109702-116125 Trifolium pratense
Tp57577_TGAC_v2_gene4288 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_34: 115626-116125 Trifolium pratense
Tp57577_TGAC_v2_gene4288 0.5kb downstream 0.5kb downstream 6424 true Tp57577_TGAC_v2_scaf_34: 109202-115625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_34: 109202-109701 Trifolium pratense
Tp57577_TGAC_v2_gene4288 1.0kb upstream 1.0kb upstream 6924 true Tp57577_TGAC_v2_scaf_34: 109702-116625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_34: 115626-116625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 1.0kb downstream 1.0kb downstream 6924 true Tp57577_TGAC_v2_scaf_34: 108702-115625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_34: 108702-109701 Trifolium pratense
Tp57577_TGAC_v2_gene4288 2.0kb upstream 2.0kb upstream 7924 true Tp57577_TGAC_v2_scaf_34: 109702-117625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_34: 115626-117625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 2.0kb downstream 2.0kb downstream 7924 true Tp57577_TGAC_v2_scaf_34: 107702-115625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_34: 107702-109701 Trifolium pratense
Tp57577_TGAC_v2_gene4288 5.0kb upstream 5.0kb upstream 10924 true Tp57577_TGAC_v2_scaf_34: 109702-120625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_34: 115626-120625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 5.0kb downstream 5.0kb downstream 10924 true Tp57577_TGAC_v2_scaf_34: 104702-115625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_34: 104702-109701 Trifolium pratense
Tp57577_TGAC_v2_gene4288 10.0kb upstream 10.0kb upstream 15924 true Tp57577_TGAC_v2_scaf_34: 109702-125625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_34: 115626-125625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 10.0kb downstream 10.0kb downstream 15924 true Tp57577_TGAC_v2_scaf_34: 99702-115625 Trifolium pratense
Tp57577_TGAC_v2_gene4288 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_34: 99702-109701 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307813 5265 Fabidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain