Gene : Tp57577_TGAC_v2_gene26259 T. pratense v2
Defline:  (1 of 4) PTHR34777:SF1 - VQ MOTIF-CONTAINING PROTEIN Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene26259 Secondary Identifier:  ? PAC:35976697
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26259 0.5kb upstream 0.5kb upstream 1152 true Tp57577_TGAC_v2_scaf_156: 5274-6425 Trifolium pratense
Tp57577_TGAC_v2_gene26259 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_156: 5926-6425 Trifolium pratense
Tp57577_TGAC_v2_gene26259 0.5kb downstream 0.5kb downstream 1152 true Tp57577_TGAC_v2_scaf_156: 4774-5925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_156: 4774-5273 Trifolium pratense
Tp57577_TGAC_v2_gene26259 1.0kb upstream 1.0kb upstream 1652 true Tp57577_TGAC_v2_scaf_156: 5274-6925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_156: 5926-6925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 1.0kb downstream 1.0kb downstream 1652 true Tp57577_TGAC_v2_scaf_156: 4274-5925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_156: 4274-5273 Trifolium pratense
Tp57577_TGAC_v2_gene26259 2.0kb upstream 2.0kb upstream 2652 true Tp57577_TGAC_v2_scaf_156: 5274-7925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_156: 5926-7925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 2.0kb downstream 2.0kb downstream 2652 true Tp57577_TGAC_v2_scaf_156: 3274-5925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_156: 3274-5273 Trifolium pratense
Tp57577_TGAC_v2_gene26259 5.0kb upstream 5.0kb upstream 5652 true Tp57577_TGAC_v2_scaf_156: 5274-10925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_156: 5926-10925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 5.0kb downstream 5.0kb downstream 5652 true Tp57577_TGAC_v2_scaf_156: 274-5925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_156: 274-5273 Trifolium pratense
Tp57577_TGAC_v2_gene26259 10.0kb upstream 10.0kb upstream 10652 true Tp57577_TGAC_v2_scaf_156: 5274-15925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_156: 5926-15925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 10.0kb downstream 10.0kb downstream 5925 true Tp57577_TGAC_v2_scaf_156: 1-5925 Trifolium pratense
Tp57577_TGAC_v2_gene26259 10.0kb downstream 10.0kb downstream 5273 false Tp57577_TGAC_v2_scaf_156: 1-5273 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026461 5273 Angiosperm View MSA
122298557 5265 Fabidae View MSA
124050155 5270 Rosid View MSA
123744131 5271 Pentapetalae View MSA
122770912 5272 Eudicot View MSA
121296343 5274 Embryophyte View MSA
123334522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain