Gene : Tp57577_TGAC_v2_gene4343 T. pratense v2
Defline:  (1 of 4) K01785 - aldose 1-epimerase (galM, GALM) Genomic Order:  77
Name:  ? Tp57577_TGAC_v2_gene4343 Secondary Identifier:  ? PAC:35960558
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY66-422 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4343 0.5kb upstream 0.5kb upstream 6682 true Tp57577_TGAC_v2_scaf_34: 654164-660845 Trifolium pratense
Tp57577_TGAC_v2_gene4343 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_34: 660346-660845 Trifolium pratense
Tp57577_TGAC_v2_gene4343 0.5kb downstream 0.5kb downstream 6682 true Tp57577_TGAC_v2_scaf_34: 653664-660345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_34: 653664-654163 Trifolium pratense
Tp57577_TGAC_v2_gene4343 1.0kb upstream 1.0kb upstream 7182 true Tp57577_TGAC_v2_scaf_34: 654164-661345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_34: 660346-661345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 1.0kb downstream 1.0kb downstream 7182 true Tp57577_TGAC_v2_scaf_34: 653164-660345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_34: 653164-654163 Trifolium pratense
Tp57577_TGAC_v2_gene4343 2.0kb upstream 2.0kb upstream 8182 true Tp57577_TGAC_v2_scaf_34: 654164-662345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_34: 660346-662345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 2.0kb downstream 2.0kb downstream 8182 true Tp57577_TGAC_v2_scaf_34: 652164-660345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_34: 652164-654163 Trifolium pratense
Tp57577_TGAC_v2_gene4343 5.0kb upstream 5.0kb upstream 11182 true Tp57577_TGAC_v2_scaf_34: 654164-665345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_34: 660346-665345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 5.0kb downstream 5.0kb downstream 11182 true Tp57577_TGAC_v2_scaf_34: 649164-660345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_34: 649164-654163 Trifolium pratense
Tp57577_TGAC_v2_gene4343 10.0kb upstream 10.0kb upstream 16182 true Tp57577_TGAC_v2_scaf_34: 654164-670345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_34: 660346-670345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 10.0kb downstream 10.0kb downstream 16182 true Tp57577_TGAC_v2_scaf_34: 644164-660345 Trifolium pratense
Tp57577_TGAC_v2_gene4343 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_34: 644164-654163 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308649 5265 Fabidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain