Gene : Tp57577_TGAC_v2_gene4349 T. pratense v2
Defline:  (1 of 14) PF05097 - Protein of unknown function (DUF688) (DUF688) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene4349 Secondary Identifier:  ? PAC:35960534
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4349 0.5kb upstream 0.5kb upstream 2946 true Tp57577_TGAC_v2_scaf_34: 17173-20118 Trifolium pratense
Tp57577_TGAC_v2_gene4349 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_34: 17173-17672 Trifolium pratense
Tp57577_TGAC_v2_gene4349 0.5kb downstream 0.5kb downstream 2946 true Tp57577_TGAC_v2_scaf_34: 17673-20618 Trifolium pratense
Tp57577_TGAC_v2_gene4349 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_34: 20119-20618 Trifolium pratense
Tp57577_TGAC_v2_gene4349 1.0kb upstream 1.0kb upstream 3446 true Tp57577_TGAC_v2_scaf_34: 16673-20118 Trifolium pratense
Tp57577_TGAC_v2_gene4349 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_34: 16673-17672 Trifolium pratense
Tp57577_TGAC_v2_gene4349 1.0kb downstream 1.0kb downstream 3446 true Tp57577_TGAC_v2_scaf_34: 17673-21118 Trifolium pratense
Tp57577_TGAC_v2_gene4349 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_34: 20119-21118 Trifolium pratense
Tp57577_TGAC_v2_gene4349 2.0kb upstream 2.0kb upstream 4446 true Tp57577_TGAC_v2_scaf_34: 15673-20118 Trifolium pratense
Tp57577_TGAC_v2_gene4349 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_34: 15673-17672 Trifolium pratense
Tp57577_TGAC_v2_gene4349 2.0kb downstream 2.0kb downstream 4446 true Tp57577_TGAC_v2_scaf_34: 17673-22118 Trifolium pratense
Tp57577_TGAC_v2_gene4349 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_34: 20119-22118 Trifolium pratense
Tp57577_TGAC_v2_gene4349 5.0kb upstream 5.0kb upstream 7446 true Tp57577_TGAC_v2_scaf_34: 12673-20118 Trifolium pratense
Tp57577_TGAC_v2_gene4349 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_34: 12673-17672 Trifolium pratense
Tp57577_TGAC_v2_gene4349 5.0kb downstream 5.0kb downstream 7446 true Tp57577_TGAC_v2_scaf_34: 17673-25118 Trifolium pratense
Tp57577_TGAC_v2_gene4349 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_34: 20119-25118 Trifolium pratense
Tp57577_TGAC_v2_gene4349 10.0kb upstream 10.0kb upstream 12446 true Tp57577_TGAC_v2_scaf_34: 7673-20118 Trifolium pratense
Tp57577_TGAC_v2_gene4349 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_34: 7673-17672 Trifolium pratense
Tp57577_TGAC_v2_gene4349 10.0kb downstream 10.0kb downstream 12446 true Tp57577_TGAC_v2_scaf_34: 17673-30118 Trifolium pratense
Tp57577_TGAC_v2_gene4349 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_34: 20119-30118 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303788 5265 Fabidae View MSA
124064039 5270 Rosid View MSA
123745252 5271 Pentapetalae View MSA
122793682 5272 Eudicot View MSA
122048199 5273 Angiosperm View MSA
121349828 5274 Embryophyte View MSA
123381462 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain