Gene : Tp57577_TGAC_v2_gene39766 T. pratense v2
Defline:  (1 of 1) K15128 - mediator of RNA polymerase II transcription subunit 6 (MED6) Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene39766 Secondary Identifier:  ? PAC:35960923
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39766 0.5kb upstream 0.5kb upstream 5732 true Tp57577_TGAC_v2_scaf_1567: 11014-16745 Trifolium pratense
Tp57577_TGAC_v2_gene39766 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1567: 16246-16745 Trifolium pratense
Tp57577_TGAC_v2_gene39766 0.5kb downstream 0.5kb downstream 5732 true Tp57577_TGAC_v2_scaf_1567: 10514-16245 Trifolium pratense
Tp57577_TGAC_v2_gene39766 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1567: 10514-11013 Trifolium pratense
Tp57577_TGAC_v2_gene39766 1.0kb upstream 1.0kb upstream 6232 true Tp57577_TGAC_v2_scaf_1567: 11014-17245 Trifolium pratense
Tp57577_TGAC_v2_gene39766 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1567: 16246-17245 Trifolium pratense
Tp57577_TGAC_v2_gene39766 1.0kb downstream 1.0kb downstream 6232 true Tp57577_TGAC_v2_scaf_1567: 10014-16245 Trifolium pratense
Tp57577_TGAC_v2_gene39766 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1567: 10014-11013 Trifolium pratense
Tp57577_TGAC_v2_gene39766 2.0kb upstream 2.0kb upstream 6690 true Tp57577_TGAC_v2_scaf_1567: 11014-17703 Trifolium pratense
Tp57577_TGAC_v2_gene39766 2.0kb upstream 2.0kb upstream 1458 false Tp57577_TGAC_v2_scaf_1567: 16246-17703 Trifolium pratense
Tp57577_TGAC_v2_gene39766 2.0kb downstream 2.0kb downstream 7232 true Tp57577_TGAC_v2_scaf_1567: 9014-16245 Trifolium pratense
Tp57577_TGAC_v2_gene39766 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1567: 9014-11013 Trifolium pratense
Tp57577_TGAC_v2_gene39766 5.0kb upstream 5.0kb upstream 6690 true Tp57577_TGAC_v2_scaf_1567: 11014-17703 Trifolium pratense
Tp57577_TGAC_v2_gene39766 5.0kb upstream 5.0kb upstream 1458 false Tp57577_TGAC_v2_scaf_1567: 16246-17703 Trifolium pratense
Tp57577_TGAC_v2_gene39766 5.0kb downstream 5.0kb downstream 10232 true Tp57577_TGAC_v2_scaf_1567: 6014-16245 Trifolium pratense
Tp57577_TGAC_v2_gene39766 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1567: 6014-11013 Trifolium pratense
Tp57577_TGAC_v2_gene39766 10.0kb upstream 10.0kb upstream 6690 true Tp57577_TGAC_v2_scaf_1567: 11014-17703 Trifolium pratense
Tp57577_TGAC_v2_gene39766 10.0kb upstream 10.0kb upstream 1458 false Tp57577_TGAC_v2_scaf_1567: 16246-17703 Trifolium pratense
Tp57577_TGAC_v2_gene39766 10.0kb downstream 10.0kb downstream 15232 true Tp57577_TGAC_v2_scaf_1567: 1014-16245 Trifolium pratense
Tp57577_TGAC_v2_gene39766 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1567: 1014-11013 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299825 5265 Fabidae View MSA
124065593 5270 Rosid View MSA
123740699 5271 Pentapetalae View MSA
122793501 5272 Eudicot View MSA
122048865 5273 Angiosperm View MSA
121348373 5274 Embryophyte View MSA
123425020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain