Gene : Tp57577_TGAC_v2_gene23206 T. pratense v2
Defline:  (1 of 1) K03934 - NADH dehydrogenase (ubiquinone) Fe-S protein 1 (NDUFS1) Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene23206 Secondary Identifier:  ? PAC:35982504
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-3781 Trifolium pratense pathologic  
Tpratense PWY-4302 Trifolium pratense pathologic  
Tpratense PWY-5083 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23206 0.5kb upstream 0.5kb upstream 6929 true Tp57577_TGAC_v2_scaf_982: 15557-22485 Trifolium pratense
Tp57577_TGAC_v2_gene23206 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_982: 21986-22485 Trifolium pratense
Tp57577_TGAC_v2_gene23206 0.5kb downstream 0.5kb downstream 6929 true Tp57577_TGAC_v2_scaf_982: 15057-21985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_982: 15057-15556 Trifolium pratense
Tp57577_TGAC_v2_gene23206 1.0kb upstream 1.0kb upstream 7429 true Tp57577_TGAC_v2_scaf_982: 15557-22985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_982: 21986-22985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 1.0kb downstream 1.0kb downstream 7429 true Tp57577_TGAC_v2_scaf_982: 14557-21985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_982: 14557-15556 Trifolium pratense
Tp57577_TGAC_v2_gene23206 2.0kb upstream 2.0kb upstream 8429 true Tp57577_TGAC_v2_scaf_982: 15557-23985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_982: 21986-23985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 2.0kb downstream 2.0kb downstream 8429 true Tp57577_TGAC_v2_scaf_982: 13557-21985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_982: 13557-15556 Trifolium pratense
Tp57577_TGAC_v2_gene23206 5.0kb upstream 5.0kb upstream 11429 true Tp57577_TGAC_v2_scaf_982: 15557-26985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_982: 21986-26985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 5.0kb downstream 5.0kb downstream 11429 true Tp57577_TGAC_v2_scaf_982: 10557-21985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_982: 10557-15556 Trifolium pratense
Tp57577_TGAC_v2_gene23206 10.0kb upstream 10.0kb upstream 16429 true Tp57577_TGAC_v2_scaf_982: 15557-31985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_982: 21986-31985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 10.0kb downstream 10.0kb downstream 16429 true Tp57577_TGAC_v2_scaf_982: 5557-21985 Trifolium pratense
Tp57577_TGAC_v2_gene23206 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_982: 5557-15556 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302283 5265 Fabidae View MSA
124062856 5270 Rosid View MSA
123737847 5271 Pentapetalae View MSA
122786481 5272 Eudicot View MSA
122044121 5273 Angiosperm View MSA
121350903 5274 Embryophyte View MSA
123424434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain