Gene : Tp57577_TGAC_v2_gene2154 T. pratense v2
Defline:  (1 of 1) 2.3.1.199//6.2.1.2 - Very-long-chain 3-oxoacyl-CoA synthase / Very-long-chain beta-ketoacyl-CoA synthase // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  2773
Name:  ? Tp57577_TGAC_v2_gene2154 Secondary Identifier:  ? PAC:35970912
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Sequence Feature Displayer

Ontology Annotation Displayer

18 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1121 Trifolium pratense pathologic  
Tpratense PWY-321 Trifolium pratense pathologic  
Tpratense PWY-5080 Trifolium pratense pathologic  
Tpratense PWY-5136 Trifolium pratense pathologic  
Tpratense PWY-5143 Trifolium pratense pathologic  
Tpratense PWY-5147 Trifolium pratense pathologic  
Tpratense PWY-5156 Trifolium pratense pathologic  
Tpratense PWY-561 Trifolium pratense pathologic  
Tpratense PWY-5885 Trifolium pratense pathologic  
Tpratense PWY-5971 Trifolium pratense pathologic  
Tpratense PWY-5989 Trifolium pratense pathologic  
Tpratense PWY-6433 Trifolium pratense pathologic  
Tpratense PWY-6598 Trifolium pratense pathologic  
Tpratense PWY-6733 Trifolium pratense pathologic  
Tpratense PWY-6803 Trifolium pratense pathologic  
Tpratense PWY-7036 Trifolium pratense pathologic  
Tpratense PWY-7601 Trifolium pratense pathologic  
Tpratense PWY-7619 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2154 0.5kb upstream 0.5kb upstream 1821 true Tp57577_TGAC_v2_LG2: 25630209-25632029 Trifolium pratense
Tp57577_TGAC_v2_gene2154 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 25630209-25630708 Trifolium pratense
Tp57577_TGAC_v2_gene2154 0.5kb downstream 0.5kb downstream 1821 true Tp57577_TGAC_v2_LG2: 25630709-25632529 Trifolium pratense
Tp57577_TGAC_v2_gene2154 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 25632030-25632529 Trifolium pratense
Tp57577_TGAC_v2_gene2154 1.0kb upstream 1.0kb upstream 2321 true Tp57577_TGAC_v2_LG2: 25629709-25632029 Trifolium pratense
Tp57577_TGAC_v2_gene2154 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 25629709-25630708 Trifolium pratense
Tp57577_TGAC_v2_gene2154 1.0kb downstream 1.0kb downstream 2321 true Tp57577_TGAC_v2_LG2: 25630709-25633029 Trifolium pratense
Tp57577_TGAC_v2_gene2154 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 25632030-25633029 Trifolium pratense
Tp57577_TGAC_v2_gene2154 2.0kb upstream 2.0kb upstream 3321 true Tp57577_TGAC_v2_LG2: 25628709-25632029 Trifolium pratense
Tp57577_TGAC_v2_gene2154 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 25628709-25630708 Trifolium pratense
Tp57577_TGAC_v2_gene2154 2.0kb downstream 2.0kb downstream 3321 true Tp57577_TGAC_v2_LG2: 25630709-25634029 Trifolium pratense
Tp57577_TGAC_v2_gene2154 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 25632030-25634029 Trifolium pratense
Tp57577_TGAC_v2_gene2154 5.0kb upstream 5.0kb upstream 6321 true Tp57577_TGAC_v2_LG2: 25625709-25632029 Trifolium pratense
Tp57577_TGAC_v2_gene2154 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 25625709-25630708 Trifolium pratense
Tp57577_TGAC_v2_gene2154 5.0kb downstream 5.0kb downstream 6321 true Tp57577_TGAC_v2_LG2: 25630709-25637029 Trifolium pratense
Tp57577_TGAC_v2_gene2154 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 25632030-25637029 Trifolium pratense
Tp57577_TGAC_v2_gene2154 10.0kb upstream 10.0kb upstream 11321 true Tp57577_TGAC_v2_LG2: 25620709-25632029 Trifolium pratense
Tp57577_TGAC_v2_gene2154 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 25620709-25630708 Trifolium pratense
Tp57577_TGAC_v2_gene2154 10.0kb downstream 10.0kb downstream 11321 true Tp57577_TGAC_v2_LG2: 25630709-25642029 Trifolium pratense
Tp57577_TGAC_v2_gene2154 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 25632030-25642029 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307468 5265 Fabidae View MSA
124069111 5270 Rosid View MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain