Gene : Tp57577_TGAC_v2_gene22969 T. pratense v2
Defline:  (1 of 1) K14845 - RAT1-interacting protein (RAI1, DOM3Z) Genomic Order:  1191
Name:  ? Tp57577_TGAC_v2_gene22969 Secondary Identifier:  ? PAC:35972111
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22969 0.5kb upstream 0.5kb upstream 6045 true Tp57577_TGAC_v2_LG2: 11714267-11720311 Trifolium pratense
Tp57577_TGAC_v2_gene22969 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 11714267-11714766 Trifolium pratense
Tp57577_TGAC_v2_gene22969 0.5kb downstream 0.5kb downstream 6045 true Tp57577_TGAC_v2_LG2: 11714767-11720811 Trifolium pratense
Tp57577_TGAC_v2_gene22969 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 11720312-11720811 Trifolium pratense
Tp57577_TGAC_v2_gene22969 1.0kb upstream 1.0kb upstream 6545 true Tp57577_TGAC_v2_LG2: 11713767-11720311 Trifolium pratense
Tp57577_TGAC_v2_gene22969 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 11713767-11714766 Trifolium pratense
Tp57577_TGAC_v2_gene22969 1.0kb downstream 1.0kb downstream 6545 true Tp57577_TGAC_v2_LG2: 11714767-11721311 Trifolium pratense
Tp57577_TGAC_v2_gene22969 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 11720312-11721311 Trifolium pratense
Tp57577_TGAC_v2_gene22969 2.0kb upstream 2.0kb upstream 7545 true Tp57577_TGAC_v2_LG2: 11712767-11720311 Trifolium pratense
Tp57577_TGAC_v2_gene22969 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 11712767-11714766 Trifolium pratense
Tp57577_TGAC_v2_gene22969 2.0kb downstream 2.0kb downstream 7545 true Tp57577_TGAC_v2_LG2: 11714767-11722311 Trifolium pratense
Tp57577_TGAC_v2_gene22969 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 11720312-11722311 Trifolium pratense
Tp57577_TGAC_v2_gene22969 5.0kb upstream 5.0kb upstream 10545 true Tp57577_TGAC_v2_LG2: 11709767-11720311 Trifolium pratense
Tp57577_TGAC_v2_gene22969 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 11709767-11714766 Trifolium pratense
Tp57577_TGAC_v2_gene22969 5.0kb downstream 5.0kb downstream 10545 true Tp57577_TGAC_v2_LG2: 11714767-11725311 Trifolium pratense
Tp57577_TGAC_v2_gene22969 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 11720312-11725311 Trifolium pratense
Tp57577_TGAC_v2_gene22969 10.0kb upstream 10.0kb upstream 15545 true Tp57577_TGAC_v2_LG2: 11704767-11720311 Trifolium pratense
Tp57577_TGAC_v2_gene22969 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 11704767-11714766 Trifolium pratense
Tp57577_TGAC_v2_gene22969 10.0kb downstream 10.0kb downstream 15545 true Tp57577_TGAC_v2_LG2: 11714767-11730311 Trifolium pratense
Tp57577_TGAC_v2_gene22969 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 11720312-11730311 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306267 5265 Fabidae View MSA
124073071 5270 Rosid View MSA
123741994 5271 Pentapetalae View MSA
122794748 5272 Eudicot View MSA
122048232 5273 Angiosperm View MSA
121348274 5274 Embryophyte View MSA
123425887 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain