Gene : Tp57577_TGAC_v2_gene22290 T. pratense v2
Defline:  (1 of 2) K00234 - succinate dehydrogenase (ubiquinone) flavoprotein subunit (SDHA, SDH1) Genomic Order:  1232
Name:  ? Tp57577_TGAC_v2_gene22290 Secondary Identifier:  ? PAC:35970272
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-3781 Trifolium pratense pathologic  
Tpratense PWY-4302 Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  
Tpratense PWY-561 Trifolium pratense pathologic  
Tpratense PWY-5690 Trifolium pratense pathologic  
Tpratense PWY-7279 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22290 0.5kb upstream 0.5kb upstream 6879 true Tp57577_TGAC_v2_LG2: 12108817-12115695 Trifolium pratense
Tp57577_TGAC_v2_gene22290 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 12115196-12115695 Trifolium pratense
Tp57577_TGAC_v2_gene22290 0.5kb downstream 0.5kb downstream 6879 true Tp57577_TGAC_v2_LG2: 12108317-12115195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 12108317-12108816 Trifolium pratense
Tp57577_TGAC_v2_gene22290 1.0kb upstream 1.0kb upstream 7379 true Tp57577_TGAC_v2_LG2: 12108817-12116195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 12115196-12116195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 1.0kb downstream 1.0kb downstream 7379 true Tp57577_TGAC_v2_LG2: 12107817-12115195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 12107817-12108816 Trifolium pratense
Tp57577_TGAC_v2_gene22290 2.0kb upstream 2.0kb upstream 8379 true Tp57577_TGAC_v2_LG2: 12108817-12117195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 12115196-12117195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 2.0kb downstream 2.0kb downstream 8379 true Tp57577_TGAC_v2_LG2: 12106817-12115195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 12106817-12108816 Trifolium pratense
Tp57577_TGAC_v2_gene22290 5.0kb upstream 5.0kb upstream 11379 true Tp57577_TGAC_v2_LG2: 12108817-12120195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 12115196-12120195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 5.0kb downstream 5.0kb downstream 11379 true Tp57577_TGAC_v2_LG2: 12103817-12115195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 12103817-12108816 Trifolium pratense
Tp57577_TGAC_v2_gene22290 10.0kb upstream 10.0kb upstream 16379 true Tp57577_TGAC_v2_LG2: 12108817-12125195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 12115196-12125195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 10.0kb downstream 10.0kb downstream 16379 true Tp57577_TGAC_v2_LG2: 12098817-12115195 Trifolium pratense
Tp57577_TGAC_v2_gene22290 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 12098817-12108816 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310620 5265 Fabidae View MSA
124063356 5270 Rosid View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain