Gene : Tp57577_TGAC_v2_gene20989 T. pratense v2
Defline:  (1 of 1) PTHR11353:SF99 - CHAPERONIN 60 SUBUNIT ALPHA 2, CHLOROPLASTIC Genomic Order:  3371
Name:  ? Tp57577_TGAC_v2_gene20989 Secondary Identifier:  ? PAC:35972197
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene20989 0.5kb upstream 0.5kb upstream 7641 true Tp57577_TGAC_v2_LG2: 30044410-30052050 Trifolium pratense
Tp57577_TGAC_v2_gene20989 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 30051551-30052050 Trifolium pratense
Tp57577_TGAC_v2_gene20989 0.5kb downstream 0.5kb downstream 7641 true Tp57577_TGAC_v2_LG2: 30043910-30051550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 30043910-30044409 Trifolium pratense
Tp57577_TGAC_v2_gene20989 1.0kb upstream 1.0kb upstream 8141 true Tp57577_TGAC_v2_LG2: 30044410-30052550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 30051551-30052550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 1.0kb downstream 1.0kb downstream 8141 true Tp57577_TGAC_v2_LG2: 30043410-30051550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 30043410-30044409 Trifolium pratense
Tp57577_TGAC_v2_gene20989 2.0kb upstream 2.0kb upstream 9141 true Tp57577_TGAC_v2_LG2: 30044410-30053550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 30051551-30053550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 2.0kb downstream 2.0kb downstream 9141 true Tp57577_TGAC_v2_LG2: 30042410-30051550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 30042410-30044409 Trifolium pratense
Tp57577_TGAC_v2_gene20989 5.0kb upstream 5.0kb upstream 12141 true Tp57577_TGAC_v2_LG2: 30044410-30056550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 30051551-30056550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 5.0kb downstream 5.0kb downstream 12141 true Tp57577_TGAC_v2_LG2: 30039410-30051550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 30039410-30044409 Trifolium pratense
Tp57577_TGAC_v2_gene20989 10.0kb upstream 10.0kb upstream 17141 true Tp57577_TGAC_v2_LG2: 30044410-30061550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 30051551-30061550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 10.0kb downstream 10.0kb downstream 17141 true Tp57577_TGAC_v2_LG2: 30034410-30051550 Trifolium pratense
Tp57577_TGAC_v2_gene20989 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 30034410-30044409 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302563 5265 Fabidae View MSA
124066772 5270 Rosid View MSA
123747305 5271 Pentapetalae View MSA
122795365 5272 Eudicot View MSA
122048196 5273 Angiosperm View MSA
121346372 5274 Embryophyte View MSA
123427883 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain