Gene : Tp57577_TGAC_v2_gene24851 T. pratense v2
Defline:  (1 of 4) PTHR13301//PTHR13301:SF28 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  34
Name:  ? Tp57577_TGAC_v2_gene24851 Secondary Identifier:  ? PAC:35986977
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1001 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24851 0.5kb upstream 0.5kb upstream 2285 true Tp57577_TGAC_v2_scaf_171: 226302-228586 Trifolium pratense
Tp57577_TGAC_v2_gene24851 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_171: 228087-228586 Trifolium pratense
Tp57577_TGAC_v2_gene24851 0.5kb downstream 0.5kb downstream 2285 true Tp57577_TGAC_v2_scaf_171: 225802-228086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_171: 225802-226301 Trifolium pratense
Tp57577_TGAC_v2_gene24851 1.0kb upstream 1.0kb upstream 2785 true Tp57577_TGAC_v2_scaf_171: 226302-229086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_171: 228087-229086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 1.0kb downstream 1.0kb downstream 2785 true Tp57577_TGAC_v2_scaf_171: 225302-228086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_171: 225302-226301 Trifolium pratense
Tp57577_TGAC_v2_gene24851 2.0kb upstream 2.0kb upstream 3785 true Tp57577_TGAC_v2_scaf_171: 226302-230086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_171: 228087-230086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 2.0kb downstream 2.0kb downstream 3785 true Tp57577_TGAC_v2_scaf_171: 224302-228086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_171: 224302-226301 Trifolium pratense
Tp57577_TGAC_v2_gene24851 5.0kb upstream 5.0kb upstream 6785 true Tp57577_TGAC_v2_scaf_171: 226302-233086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_171: 228087-233086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 5.0kb downstream 5.0kb downstream 6785 true Tp57577_TGAC_v2_scaf_171: 221302-228086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_171: 221302-226301 Trifolium pratense
Tp57577_TGAC_v2_gene24851 10.0kb upstream 10.0kb upstream 11785 true Tp57577_TGAC_v2_scaf_171: 226302-238086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_171: 228087-238086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 10.0kb downstream 10.0kb downstream 11785 true Tp57577_TGAC_v2_scaf_171: 216302-228086 Trifolium pratense
Tp57577_TGAC_v2_gene24851 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_171: 216302-226301 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122288133 5265 Fabidae View MSA
124073618 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain