Gene : Tp57577_TGAC_v2_gene2705 T. pratense v2
Defline:  (1 of 2) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase Genomic Order:  2163
Name:  ? Tp57577_TGAC_v2_gene2705 Secondary Identifier:  ? PAC:35972437
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-2541 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2705 0.5kb upstream 0.5kb upstream 11733 true Tp57577_TGAC_v2_LG2: 20624838-20636570 Trifolium pratense
Tp57577_TGAC_v2_gene2705 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 20624838-20625337 Trifolium pratense
Tp57577_TGAC_v2_gene2705 0.5kb downstream 0.5kb downstream 11733 true Tp57577_TGAC_v2_LG2: 20625338-20637070 Trifolium pratense
Tp57577_TGAC_v2_gene2705 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 20636571-20637070 Trifolium pratense
Tp57577_TGAC_v2_gene2705 1.0kb upstream 1.0kb upstream 12233 true Tp57577_TGAC_v2_LG2: 20624338-20636570 Trifolium pratense
Tp57577_TGAC_v2_gene2705 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 20624338-20625337 Trifolium pratense
Tp57577_TGAC_v2_gene2705 1.0kb downstream 1.0kb downstream 12233 true Tp57577_TGAC_v2_LG2: 20625338-20637570 Trifolium pratense
Tp57577_TGAC_v2_gene2705 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 20636571-20637570 Trifolium pratense
Tp57577_TGAC_v2_gene2705 2.0kb upstream 2.0kb upstream 13233 true Tp57577_TGAC_v2_LG2: 20623338-20636570 Trifolium pratense
Tp57577_TGAC_v2_gene2705 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 20623338-20625337 Trifolium pratense
Tp57577_TGAC_v2_gene2705 2.0kb downstream 2.0kb downstream 13233 true Tp57577_TGAC_v2_LG2: 20625338-20638570 Trifolium pratense
Tp57577_TGAC_v2_gene2705 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 20636571-20638570 Trifolium pratense
Tp57577_TGAC_v2_gene2705 5.0kb upstream 5.0kb upstream 16233 true Tp57577_TGAC_v2_LG2: 20620338-20636570 Trifolium pratense
Tp57577_TGAC_v2_gene2705 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 20620338-20625337 Trifolium pratense
Tp57577_TGAC_v2_gene2705 5.0kb downstream 5.0kb downstream 16233 true Tp57577_TGAC_v2_LG2: 20625338-20641570 Trifolium pratense
Tp57577_TGAC_v2_gene2705 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 20636571-20641570 Trifolium pratense
Tp57577_TGAC_v2_gene2705 10.0kb upstream 10.0kb upstream 21233 true Tp57577_TGAC_v2_LG2: 20615338-20636570 Trifolium pratense
Tp57577_TGAC_v2_gene2705 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 20615338-20625337 Trifolium pratense
Tp57577_TGAC_v2_gene2705 10.0kb downstream 10.0kb downstream 21233 true Tp57577_TGAC_v2_LG2: 20625338-20646570 Trifolium pratense
Tp57577_TGAC_v2_gene2705 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 20636571-20646570 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305993 5265 Fabidae View MSA
124061853 5270 Rosid View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain