Gene : Tp57577_TGAC_v2_gene2100 T. pratense v2
Defline:  (1 of 5) PF04842 - Plant protein of unknown function (DUF639) (DUF639) Genomic Order:  2776
Name:  ? Tp57577_TGAC_v2_gene2100 Secondary Identifier:  ? PAC:35972465
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2100 0.5kb upstream 0.5kb upstream 7662 true Tp57577_TGAC_v2_LG2: 25649447-25657108 Trifolium pratense
Tp57577_TGAC_v2_gene2100 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 25656609-25657108 Trifolium pratense
Tp57577_TGAC_v2_gene2100 0.5kb downstream 0.5kb downstream 7662 true Tp57577_TGAC_v2_LG2: 25648947-25656608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 25648947-25649446 Trifolium pratense
Tp57577_TGAC_v2_gene2100 1.0kb upstream 1.0kb upstream 8162 true Tp57577_TGAC_v2_LG2: 25649447-25657608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 25656609-25657608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 1.0kb downstream 1.0kb downstream 8162 true Tp57577_TGAC_v2_LG2: 25648447-25656608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 25648447-25649446 Trifolium pratense
Tp57577_TGAC_v2_gene2100 2.0kb upstream 2.0kb upstream 9162 true Tp57577_TGAC_v2_LG2: 25649447-25658608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 25656609-25658608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 2.0kb downstream 2.0kb downstream 9162 true Tp57577_TGAC_v2_LG2: 25647447-25656608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 25647447-25649446 Trifolium pratense
Tp57577_TGAC_v2_gene2100 5.0kb upstream 5.0kb upstream 12162 true Tp57577_TGAC_v2_LG2: 25649447-25661608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 25656609-25661608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 5.0kb downstream 5.0kb downstream 12162 true Tp57577_TGAC_v2_LG2: 25644447-25656608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 25644447-25649446 Trifolium pratense
Tp57577_TGAC_v2_gene2100 10.0kb upstream 10.0kb upstream 17162 true Tp57577_TGAC_v2_LG2: 25649447-25666608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 25656609-25666608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 10.0kb downstream 10.0kb downstream 17162 true Tp57577_TGAC_v2_LG2: 25639447-25656608 Trifolium pratense
Tp57577_TGAC_v2_gene2100 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 25639447-25649446 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302759 5265 Fabidae View MSA
124061287 5270 Rosid View MSA
123736965 5271 Pentapetalae View MSA
122793171 5272 Eudicot View MSA
122042087 5273 Angiosperm View MSA
121347344 5274 Embryophyte View MSA
123380532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain