Gene : Tp57577_TGAC_v2_gene2116 T. pratense v2
Defline:  (1 of 4) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2779
Name:  ? Tp57577_TGAC_v2_gene2116 Secondary Identifier:  ? PAC:35973258
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2116 0.5kb upstream 0.5kb upstream 3127 true Tp57577_TGAC_v2_LG2: 25669392-25672518 Trifolium pratense
Tp57577_TGAC_v2_gene2116 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 25672019-25672518 Trifolium pratense
Tp57577_TGAC_v2_gene2116 0.5kb downstream 0.5kb downstream 3127 true Tp57577_TGAC_v2_LG2: 25668892-25672018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 25668892-25669391 Trifolium pratense
Tp57577_TGAC_v2_gene2116 1.0kb upstream 1.0kb upstream 3627 true Tp57577_TGAC_v2_LG2: 25669392-25673018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 25672019-25673018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 1.0kb downstream 1.0kb downstream 3627 true Tp57577_TGAC_v2_LG2: 25668392-25672018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 25668392-25669391 Trifolium pratense
Tp57577_TGAC_v2_gene2116 2.0kb upstream 2.0kb upstream 4627 true Tp57577_TGAC_v2_LG2: 25669392-25674018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 25672019-25674018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 2.0kb downstream 2.0kb downstream 4627 true Tp57577_TGAC_v2_LG2: 25667392-25672018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 25667392-25669391 Trifolium pratense
Tp57577_TGAC_v2_gene2116 5.0kb upstream 5.0kb upstream 7627 true Tp57577_TGAC_v2_LG2: 25669392-25677018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 25672019-25677018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 5.0kb downstream 5.0kb downstream 7627 true Tp57577_TGAC_v2_LG2: 25664392-25672018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 25664392-25669391 Trifolium pratense
Tp57577_TGAC_v2_gene2116 10.0kb upstream 10.0kb upstream 12627 true Tp57577_TGAC_v2_LG2: 25669392-25682018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 25672019-25682018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 10.0kb downstream 10.0kb downstream 12627 true Tp57577_TGAC_v2_LG2: 25659392-25672018 Trifolium pratense
Tp57577_TGAC_v2_gene2116 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 25659392-25669391 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298425 5265 Fabidae View MSA
124036454 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain