Gene : Tp57577_TGAC_v2_gene24829 T. pratense v2
Defline:  (1 of 37) PF00069//PF08263//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  15
Name:  ? Tp57577_TGAC_v2_gene24829 Secondary Identifier:  ? PAC:35986993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24829 0.5kb upstream 0.5kb upstream 5409 true Tp57577_TGAC_v2_scaf_171: 93657-99065 Trifolium pratense
Tp57577_TGAC_v2_gene24829 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_171: 98566-99065 Trifolium pratense
Tp57577_TGAC_v2_gene24829 0.5kb downstream 0.5kb downstream 5409 true Tp57577_TGAC_v2_scaf_171: 93157-98565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_171: 93157-93656 Trifolium pratense
Tp57577_TGAC_v2_gene24829 1.0kb upstream 1.0kb upstream 5909 true Tp57577_TGAC_v2_scaf_171: 93657-99565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_171: 98566-99565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 1.0kb downstream 1.0kb downstream 5909 true Tp57577_TGAC_v2_scaf_171: 92657-98565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_171: 92657-93656 Trifolium pratense
Tp57577_TGAC_v2_gene24829 2.0kb upstream 2.0kb upstream 6909 true Tp57577_TGAC_v2_scaf_171: 93657-100565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_171: 98566-100565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 2.0kb downstream 2.0kb downstream 6909 true Tp57577_TGAC_v2_scaf_171: 91657-98565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_171: 91657-93656 Trifolium pratense
Tp57577_TGAC_v2_gene24829 5.0kb upstream 5.0kb upstream 9909 true Tp57577_TGAC_v2_scaf_171: 93657-103565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_171: 98566-103565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 5.0kb downstream 5.0kb downstream 9909 true Tp57577_TGAC_v2_scaf_171: 88657-98565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_171: 88657-93656 Trifolium pratense
Tp57577_TGAC_v2_gene24829 10.0kb upstream 10.0kb upstream 14909 true Tp57577_TGAC_v2_scaf_171: 93657-108565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_171: 98566-108565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 10.0kb downstream 10.0kb downstream 14909 true Tp57577_TGAC_v2_scaf_171: 83657-98565 Trifolium pratense
Tp57577_TGAC_v2_gene24829 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_171: 83657-93656 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300825 5265 Fabidae View MSA
124063050 5270 Rosid View MSA
123736921 5271 Pentapetalae View MSA
122790705 5272 Eudicot View MSA
122048314 5273 Angiosperm View MSA
121310927 5274 Embryophyte View MSA
123348299 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain