Gene : Tp57577_TGAC_v2_gene18342 T. pratense v2
Defline:  (1 of 8) PF13975 - gag-polyprotein putative aspartyl protease (gag-asp_proteas) Genomic Order:  271
Name:  ? Tp57577_TGAC_v2_gene18342 Secondary Identifier:  ? PAC:35971614
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene18342 0.5kb upstream 0.5kb upstream 3610 true Tp57577_TGAC_v2_LG2: 2610434-2614043 Trifolium pratense
Tp57577_TGAC_v2_gene18342 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 2613544-2614043 Trifolium pratense
Tp57577_TGAC_v2_gene18342 0.5kb downstream 0.5kb downstream 3610 true Tp57577_TGAC_v2_LG2: 2609934-2613543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 2609934-2610433 Trifolium pratense
Tp57577_TGAC_v2_gene18342 1.0kb upstream 1.0kb upstream 4110 true Tp57577_TGAC_v2_LG2: 2610434-2614543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 2613544-2614543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 1.0kb downstream 1.0kb downstream 4110 true Tp57577_TGAC_v2_LG2: 2609434-2613543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 2609434-2610433 Trifolium pratense
Tp57577_TGAC_v2_gene18342 2.0kb upstream 2.0kb upstream 5110 true Tp57577_TGAC_v2_LG2: 2610434-2615543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 2613544-2615543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 2.0kb downstream 2.0kb downstream 5110 true Tp57577_TGAC_v2_LG2: 2608434-2613543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 2608434-2610433 Trifolium pratense
Tp57577_TGAC_v2_gene18342 5.0kb upstream 5.0kb upstream 8110 true Tp57577_TGAC_v2_LG2: 2610434-2618543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 2613544-2618543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 5.0kb downstream 5.0kb downstream 8110 true Tp57577_TGAC_v2_LG2: 2605434-2613543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 2605434-2610433 Trifolium pratense
Tp57577_TGAC_v2_gene18342 10.0kb upstream 10.0kb upstream 13110 true Tp57577_TGAC_v2_LG2: 2610434-2623543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 2613544-2623543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 10.0kb downstream 10.0kb downstream 13110 true Tp57577_TGAC_v2_LG2: 2600434-2613543 Trifolium pratense
Tp57577_TGAC_v2_gene18342 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 2600434-2610433 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029860 5273 Angiosperm View MSA
122314921 5265 Fabidae View MSA
124071412 5270 Rosid View MSA
123753670 5271 Pentapetalae View MSA
122775191 5272 Eudicot View MSA
121350456 5274 Embryophyte View MSA
123381742 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain