Gene : Tp57577_TGAC_v2_gene21054 T. pratense v2
Defline:  (1 of 4) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  992
Name:  ? Tp57577_TGAC_v2_gene21054 Secondary Identifier:  ? PAC:35970155
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-2724 Trifolium pratense pathologic  
Tpratense PWY-6054 Trifolium pratense pathologic  
Tpratense PWY66-21 Trifolium pratense pathologic  
Tpratense PWY66-389 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21054 0.5kb upstream 0.5kb upstream 5228 true Tp57577_TGAC_v2_LG2: 9755457-9760684 Trifolium pratense
Tp57577_TGAC_v2_gene21054 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 9755457-9755956 Trifolium pratense
Tp57577_TGAC_v2_gene21054 0.5kb downstream 0.5kb downstream 5228 true Tp57577_TGAC_v2_LG2: 9755957-9761184 Trifolium pratense
Tp57577_TGAC_v2_gene21054 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 9760685-9761184 Trifolium pratense
Tp57577_TGAC_v2_gene21054 1.0kb upstream 1.0kb upstream 5728 true Tp57577_TGAC_v2_LG2: 9754957-9760684 Trifolium pratense
Tp57577_TGAC_v2_gene21054 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 9754957-9755956 Trifolium pratense
Tp57577_TGAC_v2_gene21054 1.0kb downstream 1.0kb downstream 5728 true Tp57577_TGAC_v2_LG2: 9755957-9761684 Trifolium pratense
Tp57577_TGAC_v2_gene21054 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 9760685-9761684 Trifolium pratense
Tp57577_TGAC_v2_gene21054 2.0kb upstream 2.0kb upstream 6728 true Tp57577_TGAC_v2_LG2: 9753957-9760684 Trifolium pratense
Tp57577_TGAC_v2_gene21054 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 9753957-9755956 Trifolium pratense
Tp57577_TGAC_v2_gene21054 2.0kb downstream 2.0kb downstream 6728 true Tp57577_TGAC_v2_LG2: 9755957-9762684 Trifolium pratense
Tp57577_TGAC_v2_gene21054 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 9760685-9762684 Trifolium pratense
Tp57577_TGAC_v2_gene21054 5.0kb upstream 5.0kb upstream 9728 true Tp57577_TGAC_v2_LG2: 9750957-9760684 Trifolium pratense
Tp57577_TGAC_v2_gene21054 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 9750957-9755956 Trifolium pratense
Tp57577_TGAC_v2_gene21054 5.0kb downstream 5.0kb downstream 9728 true Tp57577_TGAC_v2_LG2: 9755957-9765684 Trifolium pratense
Tp57577_TGAC_v2_gene21054 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 9760685-9765684 Trifolium pratense
Tp57577_TGAC_v2_gene21054 10.0kb upstream 10.0kb upstream 14728 true Tp57577_TGAC_v2_LG2: 9745957-9760684 Trifolium pratense
Tp57577_TGAC_v2_gene21054 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 9745957-9755956 Trifolium pratense
Tp57577_TGAC_v2_gene21054 10.0kb downstream 10.0kb downstream 14728 true Tp57577_TGAC_v2_LG2: 9755957-9770684 Trifolium pratense
Tp57577_TGAC_v2_gene21054 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 9760685-9770684 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296660 5265 Fabidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain