Gene : Tp57577_TGAC_v2_gene19387 T. pratense v2
Defline:  (1 of 41) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  982
Name:  ? Tp57577_TGAC_v2_gene19387 Secondary Identifier:  ? PAC:35971652
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19387 0.5kb upstream 0.5kb upstream 3089 true Tp57577_TGAC_v2_LG2: 9669753-9672841 Trifolium pratense
Tp57577_TGAC_v2_gene19387 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 9672342-9672841 Trifolium pratense
Tp57577_TGAC_v2_gene19387 0.5kb downstream 0.5kb downstream 3089 true Tp57577_TGAC_v2_LG2: 9669253-9672341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 9669253-9669752 Trifolium pratense
Tp57577_TGAC_v2_gene19387 1.0kb upstream 1.0kb upstream 3589 true Tp57577_TGAC_v2_LG2: 9669753-9673341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 9672342-9673341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 1.0kb downstream 1.0kb downstream 3589 true Tp57577_TGAC_v2_LG2: 9668753-9672341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 9668753-9669752 Trifolium pratense
Tp57577_TGAC_v2_gene19387 2.0kb upstream 2.0kb upstream 4589 true Tp57577_TGAC_v2_LG2: 9669753-9674341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 9672342-9674341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 2.0kb downstream 2.0kb downstream 4589 true Tp57577_TGAC_v2_LG2: 9667753-9672341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 9667753-9669752 Trifolium pratense
Tp57577_TGAC_v2_gene19387 5.0kb upstream 5.0kb upstream 7589 true Tp57577_TGAC_v2_LG2: 9669753-9677341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 9672342-9677341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 5.0kb downstream 5.0kb downstream 7589 true Tp57577_TGAC_v2_LG2: 9664753-9672341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 9664753-9669752 Trifolium pratense
Tp57577_TGAC_v2_gene19387 10.0kb upstream 10.0kb upstream 12589 true Tp57577_TGAC_v2_LG2: 9669753-9682341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 9672342-9682341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 10.0kb downstream 10.0kb downstream 12589 true Tp57577_TGAC_v2_LG2: 9659753-9672341 Trifolium pratense
Tp57577_TGAC_v2_gene19387 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 9659753-9669752 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300709 5265 Fabidae View MSA
124060522 5270 Rosid View MSA
123738847 5271 Pentapetalae View MSA
122790244 5272 Eudicot View MSA
122041559 5273 Angiosperm View MSA
121309863 5274 Embryophyte View MSA
123347506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain