Gene : Tp57577_TGAC_v2_gene13478 T. pratense v2
Defline:  (1 of 41) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  804
Name:  ? Tp57577_TGAC_v2_gene13478 Secondary Identifier:  ? PAC:35971532
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13478 0.5kb upstream 0.5kb upstream 2365 true Tp57577_TGAC_v2_LG2: 7995126-7997490 Trifolium pratense
Tp57577_TGAC_v2_gene13478 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 7996991-7997490 Trifolium pratense
Tp57577_TGAC_v2_gene13478 0.5kb downstream 0.5kb downstream 2365 true Tp57577_TGAC_v2_LG2: 7994626-7996990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 7994626-7995125 Trifolium pratense
Tp57577_TGAC_v2_gene13478 1.0kb upstream 1.0kb upstream 2865 true Tp57577_TGAC_v2_LG2: 7995126-7997990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 7996991-7997990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 1.0kb downstream 1.0kb downstream 2865 true Tp57577_TGAC_v2_LG2: 7994126-7996990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 7994126-7995125 Trifolium pratense
Tp57577_TGAC_v2_gene13478 2.0kb upstream 2.0kb upstream 3865 true Tp57577_TGAC_v2_LG2: 7995126-7998990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 7996991-7998990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 2.0kb downstream 2.0kb downstream 3865 true Tp57577_TGAC_v2_LG2: 7993126-7996990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 7993126-7995125 Trifolium pratense
Tp57577_TGAC_v2_gene13478 5.0kb upstream 5.0kb upstream 6865 true Tp57577_TGAC_v2_LG2: 7995126-8001990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 7996991-8001990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 5.0kb downstream 5.0kb downstream 6865 true Tp57577_TGAC_v2_LG2: 7990126-7996990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 7990126-7995125 Trifolium pratense
Tp57577_TGAC_v2_gene13478 10.0kb upstream 10.0kb upstream 11865 true Tp57577_TGAC_v2_LG2: 7995126-8006990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 7996991-8006990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 10.0kb downstream 10.0kb downstream 11865 true Tp57577_TGAC_v2_LG2: 7985126-7996990 Trifolium pratense
Tp57577_TGAC_v2_gene13478 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 7985126-7995125 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299627 5265 Fabidae View MSA
124066699 5270 Rosid View MSA
123739132 5271 Pentapetalae View MSA
122788969 5272 Eudicot View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain