Gene : Tp57577_TGAC_v2_gene17292 T. pratense v2
Defline:  (1 of 1) K00938 - phosphomevalonate kinase (E2.7.4.2, mvaK2) Genomic Order:  957
Name:  ? Tp57577_TGAC_v2_gene17292 Secondary Identifier:  ? PAC:35972206
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5910 Trifolium pratense pathologic  
Tpratense PWY-922 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17292 0.5kb upstream 0.5kb upstream 7164 true Tp57577_TGAC_v2_LG2: 9417238-9424401 Trifolium pratense
Tp57577_TGAC_v2_gene17292 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 9423902-9424401 Trifolium pratense
Tp57577_TGAC_v2_gene17292 0.5kb downstream 0.5kb downstream 7164 true Tp57577_TGAC_v2_LG2: 9416738-9423901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 9416738-9417237 Trifolium pratense
Tp57577_TGAC_v2_gene17292 1.0kb upstream 1.0kb upstream 7664 true Tp57577_TGAC_v2_LG2: 9417238-9424901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 9423902-9424901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 1.0kb downstream 1.0kb downstream 7664 true Tp57577_TGAC_v2_LG2: 9416238-9423901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 9416238-9417237 Trifolium pratense
Tp57577_TGAC_v2_gene17292 2.0kb upstream 2.0kb upstream 8664 true Tp57577_TGAC_v2_LG2: 9417238-9425901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 9423902-9425901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 2.0kb downstream 2.0kb downstream 8664 true Tp57577_TGAC_v2_LG2: 9415238-9423901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 9415238-9417237 Trifolium pratense
Tp57577_TGAC_v2_gene17292 5.0kb upstream 5.0kb upstream 11664 true Tp57577_TGAC_v2_LG2: 9417238-9428901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 9423902-9428901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 5.0kb downstream 5.0kb downstream 11664 true Tp57577_TGAC_v2_LG2: 9412238-9423901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 9412238-9417237 Trifolium pratense
Tp57577_TGAC_v2_gene17292 10.0kb upstream 10.0kb upstream 16664 true Tp57577_TGAC_v2_LG2: 9417238-9433901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 9423902-9433901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 10.0kb downstream 10.0kb downstream 16664 true Tp57577_TGAC_v2_LG2: 9407238-9423901 Trifolium pratense
Tp57577_TGAC_v2_gene17292 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 9407238-9417237 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302119 5265 Fabidae View MSA
124060690 5270 Rosid View MSA
123748529 5271 Pentapetalae View MSA
122787383 5272 Eudicot View MSA
122043495 5273 Angiosperm View MSA
121345412 5274 Embryophyte View MSA
123380212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain