Gene : Tp57577_TGAC_v2_gene16512 T. pratense v2
Defline:  (1 of 1) PTHR13935:SF46 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  1706
Name:  ? Tp57577_TGAC_v2_gene16512 Secondary Identifier:  ? PAC:35972293
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16512 0.5kb upstream 0.5kb upstream 1759 true Tp57577_TGAC_v2_LG2: 16408870-16410628 Trifolium pratense
Tp57577_TGAC_v2_gene16512 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 16408870-16409369 Trifolium pratense
Tp57577_TGAC_v2_gene16512 0.5kb downstream 0.5kb downstream 1759 true Tp57577_TGAC_v2_LG2: 16409370-16411128 Trifolium pratense
Tp57577_TGAC_v2_gene16512 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 16410629-16411128 Trifolium pratense
Tp57577_TGAC_v2_gene16512 1.0kb upstream 1.0kb upstream 2259 true Tp57577_TGAC_v2_LG2: 16408370-16410628 Trifolium pratense
Tp57577_TGAC_v2_gene16512 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 16408370-16409369 Trifolium pratense
Tp57577_TGAC_v2_gene16512 1.0kb downstream 1.0kb downstream 2259 true Tp57577_TGAC_v2_LG2: 16409370-16411628 Trifolium pratense
Tp57577_TGAC_v2_gene16512 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 16410629-16411628 Trifolium pratense
Tp57577_TGAC_v2_gene16512 2.0kb upstream 2.0kb upstream 3259 true Tp57577_TGAC_v2_LG2: 16407370-16410628 Trifolium pratense
Tp57577_TGAC_v2_gene16512 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 16407370-16409369 Trifolium pratense
Tp57577_TGAC_v2_gene16512 2.0kb downstream 2.0kb downstream 3259 true Tp57577_TGAC_v2_LG2: 16409370-16412628 Trifolium pratense
Tp57577_TGAC_v2_gene16512 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 16410629-16412628 Trifolium pratense
Tp57577_TGAC_v2_gene16512 5.0kb upstream 5.0kb upstream 6259 true Tp57577_TGAC_v2_LG2: 16404370-16410628 Trifolium pratense
Tp57577_TGAC_v2_gene16512 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 16404370-16409369 Trifolium pratense
Tp57577_TGAC_v2_gene16512 5.0kb downstream 5.0kb downstream 6259 true Tp57577_TGAC_v2_LG2: 16409370-16415628 Trifolium pratense
Tp57577_TGAC_v2_gene16512 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 16410629-16415628 Trifolium pratense
Tp57577_TGAC_v2_gene16512 10.0kb upstream 10.0kb upstream 11259 true Tp57577_TGAC_v2_LG2: 16399370-16410628 Trifolium pratense
Tp57577_TGAC_v2_gene16512 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 16399370-16409369 Trifolium pratense
Tp57577_TGAC_v2_gene16512 10.0kb downstream 10.0kb downstream 11259 true Tp57577_TGAC_v2_LG2: 16409370-16420628 Trifolium pratense
Tp57577_TGAC_v2_gene16512 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 16410629-16420628 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122309739 5265 Fabidae View MSA
124073436 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain