Gene : Tp57577_TGAC_v2_gene34055 T. pratense v2
Defline:  (1 of 1) PTHR11078 - N UTILIZATION SUBSTANCE PROTEIN B-RELATED Genomic Order:  3159
Name:  ? Tp57577_TGAC_v2_gene34055 Secondary Identifier:  ? PAC:35970317
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6902 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene34055 0.5kb upstream 0.5kb upstream 10385 true Tp57577_TGAC_v2_LG2: 28495466-28505850 Trifolium pratense
Tp57577_TGAC_v2_gene34055 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 28505351-28505850 Trifolium pratense
Tp57577_TGAC_v2_gene34055 0.5kb downstream 0.5kb downstream 10385 true Tp57577_TGAC_v2_LG2: 28494966-28505350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 28494966-28495465 Trifolium pratense
Tp57577_TGAC_v2_gene34055 1.0kb upstream 1.0kb upstream 10885 true Tp57577_TGAC_v2_LG2: 28495466-28506350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 28505351-28506350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 1.0kb downstream 1.0kb downstream 10885 true Tp57577_TGAC_v2_LG2: 28494466-28505350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 28494466-28495465 Trifolium pratense
Tp57577_TGAC_v2_gene34055 2.0kb upstream 2.0kb upstream 11885 true Tp57577_TGAC_v2_LG2: 28495466-28507350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 28505351-28507350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 2.0kb downstream 2.0kb downstream 11885 true Tp57577_TGAC_v2_LG2: 28493466-28505350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 28493466-28495465 Trifolium pratense
Tp57577_TGAC_v2_gene34055 5.0kb upstream 5.0kb upstream 14885 true Tp57577_TGAC_v2_LG2: 28495466-28510350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 28505351-28510350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 5.0kb downstream 5.0kb downstream 14885 true Tp57577_TGAC_v2_LG2: 28490466-28505350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 28490466-28495465 Trifolium pratense
Tp57577_TGAC_v2_gene34055 10.0kb upstream 10.0kb upstream 19885 true Tp57577_TGAC_v2_LG2: 28495466-28515350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 28505351-28515350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 10.0kb downstream 10.0kb downstream 19885 true Tp57577_TGAC_v2_LG2: 28485466-28505350 Trifolium pratense
Tp57577_TGAC_v2_gene34055 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 28485466-28495465 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040930 5273 Angiosperm View MSA
122310681 5265 Fabidae View MSA
124062609 5270 Rosid View MSA
123737797 5271 Pentapetalae View MSA
122787171 5272 Eudicot View MSA
121351323 5274 Embryophyte View MSA
123382120 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain