Gene : Tp57577_TGAC_v2_gene33878 T. pratense v2
Defline:  (1 of 1) K00820 - glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (glmS, GFPT) Genomic Order:  1605
Name:  ? Tp57577_TGAC_v2_gene33878 Secondary Identifier:  ? PAC:35972785
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense UDPNACETYLGALSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene33878 0.5kb upstream 0.5kb upstream 9284 true Tp57577_TGAC_v2_LG2: 15594084-15603367 Trifolium pratense
Tp57577_TGAC_v2_gene33878 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 15602868-15603367 Trifolium pratense
Tp57577_TGAC_v2_gene33878 0.5kb downstream 0.5kb downstream 9284 true Tp57577_TGAC_v2_LG2: 15593584-15602867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 15593584-15594083 Trifolium pratense
Tp57577_TGAC_v2_gene33878 1.0kb upstream 1.0kb upstream 9784 true Tp57577_TGAC_v2_LG2: 15594084-15603867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 15602868-15603867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 1.0kb downstream 1.0kb downstream 9784 true Tp57577_TGAC_v2_LG2: 15593084-15602867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 15593084-15594083 Trifolium pratense
Tp57577_TGAC_v2_gene33878 2.0kb upstream 2.0kb upstream 10784 true Tp57577_TGAC_v2_LG2: 15594084-15604867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 15602868-15604867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 2.0kb downstream 2.0kb downstream 10784 true Tp57577_TGAC_v2_LG2: 15592084-15602867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 15592084-15594083 Trifolium pratense
Tp57577_TGAC_v2_gene33878 5.0kb upstream 5.0kb upstream 13784 true Tp57577_TGAC_v2_LG2: 15594084-15607867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 15602868-15607867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 5.0kb downstream 5.0kb downstream 13784 true Tp57577_TGAC_v2_LG2: 15589084-15602867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 15589084-15594083 Trifolium pratense
Tp57577_TGAC_v2_gene33878 10.0kb upstream 10.0kb upstream 18784 true Tp57577_TGAC_v2_LG2: 15594084-15612867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 15602868-15612867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 10.0kb downstream 10.0kb downstream 18784 true Tp57577_TGAC_v2_LG2: 15584084-15602867 Trifolium pratense
Tp57577_TGAC_v2_gene33878 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 15584084-15594083 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304752 5265 Fabidae View MSA
124061013 5270 Rosid View MSA
123739905 5271 Pentapetalae View MSA
122790507 5272 Eudicot View MSA
122044665 5273 Angiosperm View MSA
121344143 5274 Embryophyte View MSA
123424089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain