Gene : Tp57577_TGAC_v2_gene24949 T. pratense v2
Defline:  (1 of 1) PTHR11766 - TYROSYL-TRNA SYNTHETASE Genomic Order:  26
Name:  ? Tp57577_TGAC_v2_gene24949 Secondary Identifier:  ? PAC:35968817
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24949 0.5kb upstream 0.5kb upstream 2435 true Tp57577_TGAC_v2_scaf_177: 203971-206405 Trifolium pratense
Tp57577_TGAC_v2_gene24949 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_177: 205906-206405 Trifolium pratense
Tp57577_TGAC_v2_gene24949 0.5kb downstream 0.5kb downstream 2435 true Tp57577_TGAC_v2_scaf_177: 203471-205905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_177: 203471-203970 Trifolium pratense
Tp57577_TGAC_v2_gene24949 1.0kb upstream 1.0kb upstream 2935 true Tp57577_TGAC_v2_scaf_177: 203971-206905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_177: 205906-206905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 1.0kb downstream 1.0kb downstream 2935 true Tp57577_TGAC_v2_scaf_177: 202971-205905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_177: 202971-203970 Trifolium pratense
Tp57577_TGAC_v2_gene24949 2.0kb upstream 2.0kb upstream 3935 true Tp57577_TGAC_v2_scaf_177: 203971-207905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_177: 205906-207905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 2.0kb downstream 2.0kb downstream 3935 true Tp57577_TGAC_v2_scaf_177: 201971-205905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_177: 201971-203970 Trifolium pratense
Tp57577_TGAC_v2_gene24949 5.0kb upstream 5.0kb upstream 6935 true Tp57577_TGAC_v2_scaf_177: 203971-210905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_177: 205906-210905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 5.0kb downstream 5.0kb downstream 6935 true Tp57577_TGAC_v2_scaf_177: 198971-205905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_177: 198971-203970 Trifolium pratense
Tp57577_TGAC_v2_gene24949 10.0kb upstream 10.0kb upstream 11935 true Tp57577_TGAC_v2_scaf_177: 203971-215905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_177: 205906-215905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 10.0kb downstream 10.0kb downstream 11935 true Tp57577_TGAC_v2_scaf_177: 193971-205905 Trifolium pratense
Tp57577_TGAC_v2_gene24949 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_177: 193971-203970 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311730 5265 Fabidae View MSA
124066531 5270 Rosid View MSA
123740976 5271 Pentapetalae View MSA
122788187 5272 Eudicot View MSA
122042111 5273 Angiosperm View MSA
121344516 5274 Embryophyte View MSA
123424944 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain