Gene : Tp57577_TGAC_v2_gene36707 T. pratense v2
Defline:  (1 of 1) K08907 - light-harvesting complex I chlorophyll a/b binding protein 1 (LHCA1) Genomic Order:  113
Name:  ? Tp57577_TGAC_v2_gene36707 Secondary Identifier:  ? PAC:35972968
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene36707 0.5kb upstream 0.5kb upstream 3178 true Tp57577_TGAC_v2_LG2: 929635-932812 Trifolium pratense
Tp57577_TGAC_v2_gene36707 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 932313-932812 Trifolium pratense
Tp57577_TGAC_v2_gene36707 0.5kb downstream 0.5kb downstream 3178 true Tp57577_TGAC_v2_LG2: 929135-932312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 929135-929634 Trifolium pratense
Tp57577_TGAC_v2_gene36707 1.0kb upstream 1.0kb upstream 3678 true Tp57577_TGAC_v2_LG2: 929635-933312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 932313-933312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 1.0kb downstream 1.0kb downstream 3678 true Tp57577_TGAC_v2_LG2: 928635-932312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 928635-929634 Trifolium pratense
Tp57577_TGAC_v2_gene36707 2.0kb upstream 2.0kb upstream 4678 true Tp57577_TGAC_v2_LG2: 929635-934312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 932313-934312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 2.0kb downstream 2.0kb downstream 4678 true Tp57577_TGAC_v2_LG2: 927635-932312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 927635-929634 Trifolium pratense
Tp57577_TGAC_v2_gene36707 5.0kb upstream 5.0kb upstream 7678 true Tp57577_TGAC_v2_LG2: 929635-937312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 932313-937312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 5.0kb downstream 5.0kb downstream 7678 true Tp57577_TGAC_v2_LG2: 924635-932312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 924635-929634 Trifolium pratense
Tp57577_TGAC_v2_gene36707 10.0kb upstream 10.0kb upstream 12678 true Tp57577_TGAC_v2_LG2: 929635-942312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 932313-942312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 10.0kb downstream 10.0kb downstream 12678 true Tp57577_TGAC_v2_LG2: 919635-932312 Trifolium pratense
Tp57577_TGAC_v2_gene36707 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 919635-929634 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301540 5265 Fabidae View MSA
124067443 5270 Rosid View MSA
123742778 5271 Pentapetalae View MSA
122793443 5272 Eudicot View MSA
122044861 5273 Angiosperm View MSA
121344658 5274 Embryophyte View MSA
123424228 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain