Gene : Tp57577_TGAC_v2_gene35875 T. pratense v2
Defline:  (1 of 2) PTHR30546:SF3 - MINOR ALLERGEN Genomic Order:  1383
Name:  ? Tp57577_TGAC_v2_gene35875 Secondary Identifier:  ? PAC:35971154
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7279 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene35875 0.5kb upstream 0.5kb upstream 3175 true Tp57577_TGAC_v2_LG2: 13393989-13397163 Trifolium pratense
Tp57577_TGAC_v2_gene35875 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 13393989-13394488 Trifolium pratense
Tp57577_TGAC_v2_gene35875 0.5kb downstream 0.5kb downstream 3175 true Tp57577_TGAC_v2_LG2: 13394489-13397663 Trifolium pratense
Tp57577_TGAC_v2_gene35875 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 13397164-13397663 Trifolium pratense
Tp57577_TGAC_v2_gene35875 1.0kb upstream 1.0kb upstream 3675 true Tp57577_TGAC_v2_LG2: 13393489-13397163 Trifolium pratense
Tp57577_TGAC_v2_gene35875 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 13393489-13394488 Trifolium pratense
Tp57577_TGAC_v2_gene35875 1.0kb downstream 1.0kb downstream 3675 true Tp57577_TGAC_v2_LG2: 13394489-13398163 Trifolium pratense
Tp57577_TGAC_v2_gene35875 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 13397164-13398163 Trifolium pratense
Tp57577_TGAC_v2_gene35875 2.0kb upstream 2.0kb upstream 4675 true Tp57577_TGAC_v2_LG2: 13392489-13397163 Trifolium pratense
Tp57577_TGAC_v2_gene35875 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 13392489-13394488 Trifolium pratense
Tp57577_TGAC_v2_gene35875 2.0kb downstream 2.0kb downstream 4675 true Tp57577_TGAC_v2_LG2: 13394489-13399163 Trifolium pratense
Tp57577_TGAC_v2_gene35875 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 13397164-13399163 Trifolium pratense
Tp57577_TGAC_v2_gene35875 5.0kb upstream 5.0kb upstream 7675 true Tp57577_TGAC_v2_LG2: 13389489-13397163 Trifolium pratense
Tp57577_TGAC_v2_gene35875 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 13389489-13394488 Trifolium pratense
Tp57577_TGAC_v2_gene35875 5.0kb downstream 5.0kb downstream 7675 true Tp57577_TGAC_v2_LG2: 13394489-13402163 Trifolium pratense
Tp57577_TGAC_v2_gene35875 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 13397164-13402163 Trifolium pratense
Tp57577_TGAC_v2_gene35875 10.0kb upstream 10.0kb upstream 12675 true Tp57577_TGAC_v2_LG2: 13384489-13397163 Trifolium pratense
Tp57577_TGAC_v2_gene35875 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 13384489-13394488 Trifolium pratense
Tp57577_TGAC_v2_gene35875 10.0kb downstream 10.0kb downstream 12675 true Tp57577_TGAC_v2_LG2: 13394489-13407163 Trifolium pratense
Tp57577_TGAC_v2_gene35875 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 13397164-13407163 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313825 5265 Fabidae View MSA
124071872 5270 Rosid View MSA
123747296 5271 Pentapetalae View MSA
122787276 5272 Eudicot View MSA
122042695 5273 Angiosperm View MSA
121346048 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain