Gene : Tp57577_TGAC_v2_gene35417 T. pratense v2
Defline:  (1 of 2) K12627 - U6 snRNA-associated Sm-like protein LSm8 (LSM8) Genomic Order:  2755
Name:  ? Tp57577_TGAC_v2_gene35417 Secondary Identifier:  ? PAC:35970713
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene35417 0.5kb upstream 0.5kb upstream 2922 true Tp57577_TGAC_v2_LG2: 25491953-25494874 Trifolium pratense
Tp57577_TGAC_v2_gene35417 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 25494375-25494874 Trifolium pratense
Tp57577_TGAC_v2_gene35417 0.5kb downstream 0.5kb downstream 2922 true Tp57577_TGAC_v2_LG2: 25491453-25494374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 25491453-25491952 Trifolium pratense
Tp57577_TGAC_v2_gene35417 1.0kb upstream 1.0kb upstream 3422 true Tp57577_TGAC_v2_LG2: 25491953-25495374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 25494375-25495374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 1.0kb downstream 1.0kb downstream 3422 true Tp57577_TGAC_v2_LG2: 25490953-25494374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 25490953-25491952 Trifolium pratense
Tp57577_TGAC_v2_gene35417 2.0kb upstream 2.0kb upstream 4422 true Tp57577_TGAC_v2_LG2: 25491953-25496374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 25494375-25496374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 2.0kb downstream 2.0kb downstream 4422 true Tp57577_TGAC_v2_LG2: 25489953-25494374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 25489953-25491952 Trifolium pratense
Tp57577_TGAC_v2_gene35417 5.0kb upstream 5.0kb upstream 7422 true Tp57577_TGAC_v2_LG2: 25491953-25499374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 25494375-25499374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 5.0kb downstream 5.0kb downstream 7422 true Tp57577_TGAC_v2_LG2: 25486953-25494374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 25486953-25491952 Trifolium pratense
Tp57577_TGAC_v2_gene35417 10.0kb upstream 10.0kb upstream 12422 true Tp57577_TGAC_v2_LG2: 25491953-25504374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 25494375-25504374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 10.0kb downstream 10.0kb downstream 12422 true Tp57577_TGAC_v2_LG2: 25481953-25494374 Trifolium pratense
Tp57577_TGAC_v2_gene35417 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 25481953-25491952 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309330 5265 Fabidae View MSA
124065490 5270 Rosid View MSA
123746583 5271 Pentapetalae View MSA
122790911 5272 Eudicot View MSA
122047376 5273 Angiosperm View MSA
121345088 5274 Embryophyte View MSA
123423767 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain