Gene : Tp57577_TGAC_v2_gene5995 T. pratense v2
Defline:  (1 of 17) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  2329
Name:  ? Tp57577_TGAC_v2_gene5995 Secondary Identifier:  ? PAC:35971875
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5995 0.5kb upstream 0.5kb upstream 3538 true Tp57577_TGAC_v2_LG2: 22014777-22018314 Trifolium pratense
Tp57577_TGAC_v2_gene5995 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 22014777-22015276 Trifolium pratense
Tp57577_TGAC_v2_gene5995 0.5kb downstream 0.5kb downstream 3538 true Tp57577_TGAC_v2_LG2: 22015277-22018814 Trifolium pratense
Tp57577_TGAC_v2_gene5995 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 22018315-22018814 Trifolium pratense
Tp57577_TGAC_v2_gene5995 1.0kb upstream 1.0kb upstream 4038 true Tp57577_TGAC_v2_LG2: 22014277-22018314 Trifolium pratense
Tp57577_TGAC_v2_gene5995 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 22014277-22015276 Trifolium pratense
Tp57577_TGAC_v2_gene5995 1.0kb downstream 1.0kb downstream 4038 true Tp57577_TGAC_v2_LG2: 22015277-22019314 Trifolium pratense
Tp57577_TGAC_v2_gene5995 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 22018315-22019314 Trifolium pratense
Tp57577_TGAC_v2_gene5995 2.0kb upstream 2.0kb upstream 5038 true Tp57577_TGAC_v2_LG2: 22013277-22018314 Trifolium pratense
Tp57577_TGAC_v2_gene5995 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 22013277-22015276 Trifolium pratense
Tp57577_TGAC_v2_gene5995 2.0kb downstream 2.0kb downstream 5038 true Tp57577_TGAC_v2_LG2: 22015277-22020314 Trifolium pratense
Tp57577_TGAC_v2_gene5995 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 22018315-22020314 Trifolium pratense
Tp57577_TGAC_v2_gene5995 5.0kb upstream 5.0kb upstream 8038 true Tp57577_TGAC_v2_LG2: 22010277-22018314 Trifolium pratense
Tp57577_TGAC_v2_gene5995 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 22010277-22015276 Trifolium pratense
Tp57577_TGAC_v2_gene5995 5.0kb downstream 5.0kb downstream 8038 true Tp57577_TGAC_v2_LG2: 22015277-22023314 Trifolium pratense
Tp57577_TGAC_v2_gene5995 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 22018315-22023314 Trifolium pratense
Tp57577_TGAC_v2_gene5995 10.0kb upstream 10.0kb upstream 13038 true Tp57577_TGAC_v2_LG2: 22005277-22018314 Trifolium pratense
Tp57577_TGAC_v2_gene5995 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 22005277-22015276 Trifolium pratense
Tp57577_TGAC_v2_gene5995 10.0kb downstream 10.0kb downstream 13038 true Tp57577_TGAC_v2_LG2: 22015277-22028314 Trifolium pratense
Tp57577_TGAC_v2_gene5995 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 22018315-22028314 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780545 5273 Angiosperm View MSA
122296648 5265 Fabidae View MSA
124035727 5270 Rosid View MSA
123746693 5271 Pentapetalae View MSA
122772010 5272 Eudicot View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain