Gene : Tp57577_TGAC_v2_gene30706 T. pratense v2
Defline:  (1 of 7) PTHR21493//PTHR21493:SF142 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1066
Name:  ? Tp57577_TGAC_v2_gene30706 Secondary Identifier:  ? PAC:35971158
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPAS-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30706 0.5kb upstream 0.5kb upstream 4964 true Tp57577_TGAC_v2_LG2: 10386839-10391802 Trifolium pratense
Tp57577_TGAC_v2_gene30706 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 10386839-10387338 Trifolium pratense
Tp57577_TGAC_v2_gene30706 0.5kb downstream 0.5kb downstream 4964 true Tp57577_TGAC_v2_LG2: 10387339-10392302 Trifolium pratense
Tp57577_TGAC_v2_gene30706 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 10391803-10392302 Trifolium pratense
Tp57577_TGAC_v2_gene30706 1.0kb upstream 1.0kb upstream 5464 true Tp57577_TGAC_v2_LG2: 10386339-10391802 Trifolium pratense
Tp57577_TGAC_v2_gene30706 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 10386339-10387338 Trifolium pratense
Tp57577_TGAC_v2_gene30706 1.0kb downstream 1.0kb downstream 5464 true Tp57577_TGAC_v2_LG2: 10387339-10392802 Trifolium pratense
Tp57577_TGAC_v2_gene30706 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 10391803-10392802 Trifolium pratense
Tp57577_TGAC_v2_gene30706 2.0kb upstream 2.0kb upstream 6464 true Tp57577_TGAC_v2_LG2: 10385339-10391802 Trifolium pratense
Tp57577_TGAC_v2_gene30706 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 10385339-10387338 Trifolium pratense
Tp57577_TGAC_v2_gene30706 2.0kb downstream 2.0kb downstream 6464 true Tp57577_TGAC_v2_LG2: 10387339-10393802 Trifolium pratense
Tp57577_TGAC_v2_gene30706 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 10391803-10393802 Trifolium pratense
Tp57577_TGAC_v2_gene30706 5.0kb upstream 5.0kb upstream 9464 true Tp57577_TGAC_v2_LG2: 10382339-10391802 Trifolium pratense
Tp57577_TGAC_v2_gene30706 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 10382339-10387338 Trifolium pratense
Tp57577_TGAC_v2_gene30706 5.0kb downstream 5.0kb downstream 9464 true Tp57577_TGAC_v2_LG2: 10387339-10396802 Trifolium pratense
Tp57577_TGAC_v2_gene30706 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 10391803-10396802 Trifolium pratense
Tp57577_TGAC_v2_gene30706 10.0kb upstream 10.0kb upstream 14464 true Tp57577_TGAC_v2_LG2: 10377339-10391802 Trifolium pratense
Tp57577_TGAC_v2_gene30706 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 10377339-10387338 Trifolium pratense
Tp57577_TGAC_v2_gene30706 10.0kb downstream 10.0kb downstream 14464 true Tp57577_TGAC_v2_LG2: 10387339-10401802 Trifolium pratense
Tp57577_TGAC_v2_gene30706 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 10391803-10401802 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312329 5265 Fabidae View MSA
124069453 5270 Rosid View MSA
123746073 5271 Pentapetalae View MSA
122791572 5272 Eudicot View MSA
122051132 5273 Angiosperm View MSA
121349994 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain