Gene : Tp57577_TGAC_v2_gene24975 T. pratense v2
Defline:  (1 of 1) PTHR23315//PTHR23315:SF117 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  27
Name:  ? Tp57577_TGAC_v2_gene24975 Secondary Identifier:  ? PAC:35968795
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24975 0.5kb upstream 0.5kb upstream 6655 true Tp57577_TGAC_v2_scaf_177: 208941-215595 Trifolium pratense
Tp57577_TGAC_v2_gene24975 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_177: 208941-209440 Trifolium pratense
Tp57577_TGAC_v2_gene24975 0.5kb downstream 0.5kb downstream 6655 true Tp57577_TGAC_v2_scaf_177: 209441-216095 Trifolium pratense
Tp57577_TGAC_v2_gene24975 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_177: 215596-216095 Trifolium pratense
Tp57577_TGAC_v2_gene24975 1.0kb upstream 1.0kb upstream 7155 true Tp57577_TGAC_v2_scaf_177: 208441-215595 Trifolium pratense
Tp57577_TGAC_v2_gene24975 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_177: 208441-209440 Trifolium pratense
Tp57577_TGAC_v2_gene24975 1.0kb downstream 1.0kb downstream 7155 true Tp57577_TGAC_v2_scaf_177: 209441-216595 Trifolium pratense
Tp57577_TGAC_v2_gene24975 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_177: 215596-216595 Trifolium pratense
Tp57577_TGAC_v2_gene24975 2.0kb upstream 2.0kb upstream 8155 true Tp57577_TGAC_v2_scaf_177: 207441-215595 Trifolium pratense
Tp57577_TGAC_v2_gene24975 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_177: 207441-209440 Trifolium pratense
Tp57577_TGAC_v2_gene24975 2.0kb downstream 2.0kb downstream 8155 true Tp57577_TGAC_v2_scaf_177: 209441-217595 Trifolium pratense
Tp57577_TGAC_v2_gene24975 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_177: 215596-217595 Trifolium pratense
Tp57577_TGAC_v2_gene24975 5.0kb upstream 5.0kb upstream 11155 true Tp57577_TGAC_v2_scaf_177: 204441-215595 Trifolium pratense
Tp57577_TGAC_v2_gene24975 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_177: 204441-209440 Trifolium pratense
Tp57577_TGAC_v2_gene24975 5.0kb downstream 5.0kb downstream 11155 true Tp57577_TGAC_v2_scaf_177: 209441-220595 Trifolium pratense
Tp57577_TGAC_v2_gene24975 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_177: 215596-220595 Trifolium pratense
Tp57577_TGAC_v2_gene24975 10.0kb upstream 10.0kb upstream 16155 true Tp57577_TGAC_v2_scaf_177: 199441-215595 Trifolium pratense
Tp57577_TGAC_v2_gene24975 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_177: 199441-209440 Trifolium pratense
Tp57577_TGAC_v2_gene24975 10.0kb downstream 10.0kb downstream 16155 true Tp57577_TGAC_v2_scaf_177: 209441-225595 Trifolium pratense
Tp57577_TGAC_v2_gene24975 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_177: 215596-225595 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308370 5265 Fabidae View MSA
124065009 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain