Gene : Tp57577_TGAC_v2_gene26176 T. pratense v2
Defline:  (1 of 4) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  224
Name:  ? Tp57577_TGAC_v2_gene26176 Secondary Identifier:  ? PAC:35969538
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-3461 Trifolium pratense pathologic  
Tpratense PWY-3462 Trifolium pratense pathologic  
Tpratense PWY-3481 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26176 0.5kb upstream 0.5kb upstream 5239 true Tp57577_TGAC_v2_LG2: 2098067-2103305 Trifolium pratense
Tp57577_TGAC_v2_gene26176 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 2102806-2103305 Trifolium pratense
Tp57577_TGAC_v2_gene26176 0.5kb downstream 0.5kb downstream 5239 true Tp57577_TGAC_v2_LG2: 2097567-2102805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 2097567-2098066 Trifolium pratense
Tp57577_TGAC_v2_gene26176 1.0kb upstream 1.0kb upstream 5739 true Tp57577_TGAC_v2_LG2: 2098067-2103805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 2102806-2103805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 1.0kb downstream 1.0kb downstream 5739 true Tp57577_TGAC_v2_LG2: 2097067-2102805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 2097067-2098066 Trifolium pratense
Tp57577_TGAC_v2_gene26176 2.0kb upstream 2.0kb upstream 6739 true Tp57577_TGAC_v2_LG2: 2098067-2104805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 2102806-2104805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 2.0kb downstream 2.0kb downstream 6739 true Tp57577_TGAC_v2_LG2: 2096067-2102805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 2096067-2098066 Trifolium pratense
Tp57577_TGAC_v2_gene26176 5.0kb upstream 5.0kb upstream 9739 true Tp57577_TGAC_v2_LG2: 2098067-2107805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 2102806-2107805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 5.0kb downstream 5.0kb downstream 9739 true Tp57577_TGAC_v2_LG2: 2093067-2102805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 2093067-2098066 Trifolium pratense
Tp57577_TGAC_v2_gene26176 10.0kb upstream 10.0kb upstream 14739 true Tp57577_TGAC_v2_LG2: 2098067-2112805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 2102806-2112805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 10.0kb downstream 10.0kb downstream 14739 true Tp57577_TGAC_v2_LG2: 2088067-2102805 Trifolium pratense
Tp57577_TGAC_v2_gene26176 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 2088067-2098066 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
122309735 5265 Fabidae View MSA
124071158 5270 Rosid View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain