Gene : Tp57577_TGAC_v2_gene25893 T. pratense v2
Defline:  (1 of 2) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Genomic Order:  3228
Name:  ? Tp57577_TGAC_v2_gene25893 Secondary Identifier:  ? PAC:35973149
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25893 0.5kb upstream 0.5kb upstream 4620 true Tp57577_TGAC_v2_LG2: 29010964-29015583 Trifolium pratense
Tp57577_TGAC_v2_gene25893 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 29015084-29015583 Trifolium pratense
Tp57577_TGAC_v2_gene25893 0.5kb downstream 0.5kb downstream 4620 true Tp57577_TGAC_v2_LG2: 29010464-29015083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 29010464-29010963 Trifolium pratense
Tp57577_TGAC_v2_gene25893 1.0kb upstream 1.0kb upstream 5120 true Tp57577_TGAC_v2_LG2: 29010964-29016083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 29015084-29016083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 1.0kb downstream 1.0kb downstream 5120 true Tp57577_TGAC_v2_LG2: 29009964-29015083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 29009964-29010963 Trifolium pratense
Tp57577_TGAC_v2_gene25893 2.0kb upstream 2.0kb upstream 6120 true Tp57577_TGAC_v2_LG2: 29010964-29017083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 29015084-29017083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 2.0kb downstream 2.0kb downstream 6120 true Tp57577_TGAC_v2_LG2: 29008964-29015083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 29008964-29010963 Trifolium pratense
Tp57577_TGAC_v2_gene25893 5.0kb upstream 5.0kb upstream 9120 true Tp57577_TGAC_v2_LG2: 29010964-29020083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 29015084-29020083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 5.0kb downstream 5.0kb downstream 9120 true Tp57577_TGAC_v2_LG2: 29005964-29015083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 29005964-29010963 Trifolium pratense
Tp57577_TGAC_v2_gene25893 10.0kb upstream 10.0kb upstream 14120 true Tp57577_TGAC_v2_LG2: 29010964-29025083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 29015084-29025083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 10.0kb downstream 10.0kb downstream 14120 true Tp57577_TGAC_v2_LG2: 29000964-29015083 Trifolium pratense
Tp57577_TGAC_v2_gene25893 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 29000964-29010963 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289725 5265 Fabidae View MSA
124061574 5270 Rosid View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain