Gene : Tp57577_TGAC_v2_gene33516 T. pratense v2
Defline:  (1 of 2) 2.1.1.220 - tRNA (adenine(58)-N(1))-methyltransferase / tRNA m(1)A(58) methyltransferase Genomic Order:  348
Name:  ? Tp57577_TGAC_v2_gene33516 Secondary Identifier:  ? PAC:35973277
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6829 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene33516 0.5kb upstream 0.5kb upstream 5060 true Tp57577_TGAC_v2_LG2: 3523506-3528565 Trifolium pratense
Tp57577_TGAC_v2_gene33516 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 3523506-3524005 Trifolium pratense
Tp57577_TGAC_v2_gene33516 0.5kb downstream 0.5kb downstream 5060 true Tp57577_TGAC_v2_LG2: 3524006-3529065 Trifolium pratense
Tp57577_TGAC_v2_gene33516 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 3528566-3529065 Trifolium pratense
Tp57577_TGAC_v2_gene33516 1.0kb upstream 1.0kb upstream 5560 true Tp57577_TGAC_v2_LG2: 3523006-3528565 Trifolium pratense
Tp57577_TGAC_v2_gene33516 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 3523006-3524005 Trifolium pratense
Tp57577_TGAC_v2_gene33516 1.0kb downstream 1.0kb downstream 5560 true Tp57577_TGAC_v2_LG2: 3524006-3529565 Trifolium pratense
Tp57577_TGAC_v2_gene33516 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 3528566-3529565 Trifolium pratense
Tp57577_TGAC_v2_gene33516 2.0kb upstream 2.0kb upstream 6560 true Tp57577_TGAC_v2_LG2: 3522006-3528565 Trifolium pratense
Tp57577_TGAC_v2_gene33516 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 3522006-3524005 Trifolium pratense
Tp57577_TGAC_v2_gene33516 2.0kb downstream 2.0kb downstream 6560 true Tp57577_TGAC_v2_LG2: 3524006-3530565 Trifolium pratense
Tp57577_TGAC_v2_gene33516 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 3528566-3530565 Trifolium pratense
Tp57577_TGAC_v2_gene33516 5.0kb upstream 5.0kb upstream 9560 true Tp57577_TGAC_v2_LG2: 3519006-3528565 Trifolium pratense
Tp57577_TGAC_v2_gene33516 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 3519006-3524005 Trifolium pratense
Tp57577_TGAC_v2_gene33516 5.0kb downstream 5.0kb downstream 9560 true Tp57577_TGAC_v2_LG2: 3524006-3533565 Trifolium pratense
Tp57577_TGAC_v2_gene33516 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 3528566-3533565 Trifolium pratense
Tp57577_TGAC_v2_gene33516 10.0kb upstream 10.0kb upstream 14560 true Tp57577_TGAC_v2_LG2: 3514006-3528565 Trifolium pratense
Tp57577_TGAC_v2_gene33516 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 3514006-3524005 Trifolium pratense
Tp57577_TGAC_v2_gene33516 10.0kb downstream 10.0kb downstream 14560 true Tp57577_TGAC_v2_LG2: 3524006-3538565 Trifolium pratense
Tp57577_TGAC_v2_gene33516 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 3528566-3538565 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307322 5265 Fabidae View MSA
124067339 5270 Rosid View MSA
123740177 5271 Pentapetalae View MSA
122793445 5272 Eudicot View MSA
122045272 5273 Angiosperm View MSA
121345508 5274 Embryophyte View MSA
123423922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain