Gene : Tp57577_TGAC_v2_gene24432 T. pratense v2

Defline:  (1 of 2) PTHR31471:SF5 - F7A19.1 PROTEIN-RELATED Genomic Order:  1922
Name:  ? Tp57577_TGAC_v2_gene24432 Secondary Identifier:  ? PAC:35971584

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24432 0.5kb upstream 0.5kb upstream 2989 true Tp57577_TGAC_v2_LG2: 18562895-18565883 Trifolium pratense
Tp57577_TGAC_v2_gene24432 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 18562895-18563394 Trifolium pratense
Tp57577_TGAC_v2_gene24432 0.5kb downstream 0.5kb downstream 2989 true Tp57577_TGAC_v2_LG2: 18563395-18566383 Trifolium pratense
Tp57577_TGAC_v2_gene24432 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 18565884-18566383 Trifolium pratense
Tp57577_TGAC_v2_gene24432 1.0kb upstream 1.0kb upstream 3489 true Tp57577_TGAC_v2_LG2: 18562395-18565883 Trifolium pratense
Tp57577_TGAC_v2_gene24432 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 18562395-18563394 Trifolium pratense
Tp57577_TGAC_v2_gene24432 1.0kb downstream 1.0kb downstream 3489 true Tp57577_TGAC_v2_LG2: 18563395-18566883 Trifolium pratense
Tp57577_TGAC_v2_gene24432 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 18565884-18566883 Trifolium pratense
Tp57577_TGAC_v2_gene24432 2.0kb upstream 2.0kb upstream 4489 true Tp57577_TGAC_v2_LG2: 18561395-18565883 Trifolium pratense
Tp57577_TGAC_v2_gene24432 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 18561395-18563394 Trifolium pratense
Tp57577_TGAC_v2_gene24432 2.0kb downstream 2.0kb downstream 4489 true Tp57577_TGAC_v2_LG2: 18563395-18567883 Trifolium pratense
Tp57577_TGAC_v2_gene24432 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 18565884-18567883 Trifolium pratense
Tp57577_TGAC_v2_gene24432 5.0kb upstream 5.0kb upstream 7489 true Tp57577_TGAC_v2_LG2: 18558395-18565883 Trifolium pratense
Tp57577_TGAC_v2_gene24432 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 18558395-18563394 Trifolium pratense
Tp57577_TGAC_v2_gene24432 5.0kb downstream 5.0kb downstream 7489 true Tp57577_TGAC_v2_LG2: 18563395-18570883 Trifolium pratense
Tp57577_TGAC_v2_gene24432 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 18565884-18570883 Trifolium pratense
Tp57577_TGAC_v2_gene24432 10.0kb upstream 10.0kb upstream 12489 true Tp57577_TGAC_v2_LG2: 18553395-18565883 Trifolium pratense
Tp57577_TGAC_v2_gene24432 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 18553395-18563394 Trifolium pratense
Tp57577_TGAC_v2_gene24432 10.0kb downstream 10.0kb downstream 12489 true Tp57577_TGAC_v2_LG2: 18563395-18575883 Trifolium pratense
Tp57577_TGAC_v2_gene24432 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 18565884-18575883 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313838 5265 Fabidae View MSA
124067331 5270 Rosid View MSA
123743301 5271 Pentapetalae View MSA
122785962 5272 Eudicot View MSA
122046152 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain