Gene : Tp57577_TGAC_v2_gene2405 T. pratense v2
Defline:  (1 of 1) 2.7.7.3 - Pantetheine-phosphate adenylyltransferase / PPAT Genomic Order:  1305
Name:  ? Tp57577_TGAC_v2_gene2405 Secondary Identifier:  ? PAC:35970288
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense COA-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2405 0.5kb upstream 0.5kb upstream 5223 true Tp57577_TGAC_v2_LG2: 12712214-12717436 Trifolium pratense
Tp57577_TGAC_v2_gene2405 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 12712214-12712713 Trifolium pratense
Tp57577_TGAC_v2_gene2405 0.5kb downstream 0.5kb downstream 5223 true Tp57577_TGAC_v2_LG2: 12712714-12717936 Trifolium pratense
Tp57577_TGAC_v2_gene2405 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 12717437-12717936 Trifolium pratense
Tp57577_TGAC_v2_gene2405 1.0kb upstream 1.0kb upstream 5723 true Tp57577_TGAC_v2_LG2: 12711714-12717436 Trifolium pratense
Tp57577_TGAC_v2_gene2405 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 12711714-12712713 Trifolium pratense
Tp57577_TGAC_v2_gene2405 1.0kb downstream 1.0kb downstream 5723 true Tp57577_TGAC_v2_LG2: 12712714-12718436 Trifolium pratense
Tp57577_TGAC_v2_gene2405 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 12717437-12718436 Trifolium pratense
Tp57577_TGAC_v2_gene2405 2.0kb upstream 2.0kb upstream 6723 true Tp57577_TGAC_v2_LG2: 12710714-12717436 Trifolium pratense
Tp57577_TGAC_v2_gene2405 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 12710714-12712713 Trifolium pratense
Tp57577_TGAC_v2_gene2405 2.0kb downstream 2.0kb downstream 6723 true Tp57577_TGAC_v2_LG2: 12712714-12719436 Trifolium pratense
Tp57577_TGAC_v2_gene2405 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 12717437-12719436 Trifolium pratense
Tp57577_TGAC_v2_gene2405 5.0kb upstream 5.0kb upstream 9723 true Tp57577_TGAC_v2_LG2: 12707714-12717436 Trifolium pratense
Tp57577_TGAC_v2_gene2405 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 12707714-12712713 Trifolium pratense
Tp57577_TGAC_v2_gene2405 5.0kb downstream 5.0kb downstream 9723 true Tp57577_TGAC_v2_LG2: 12712714-12722436 Trifolium pratense
Tp57577_TGAC_v2_gene2405 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 12717437-12722436 Trifolium pratense
Tp57577_TGAC_v2_gene2405 10.0kb upstream 10.0kb upstream 14723 true Tp57577_TGAC_v2_LG2: 12702714-12717436 Trifolium pratense
Tp57577_TGAC_v2_gene2405 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 12702714-12712713 Trifolium pratense
Tp57577_TGAC_v2_gene2405 10.0kb downstream 10.0kb downstream 14723 true Tp57577_TGAC_v2_LG2: 12712714-12727436 Trifolium pratense
Tp57577_TGAC_v2_gene2405 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 12717437-12727436 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307231 5265 Fabidae View MSA
124064108 5270 Rosid View MSA
123751907 5271 Pentapetalae View MSA
122795383 5272 Eudicot View MSA
122050871 5273 Angiosperm View MSA
121345308 5274 Embryophyte View MSA
123425957 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain