Gene : Tp57577_TGAC_v2_gene2408 T. pratense v2
Defline:  (1 of 2) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Genomic Order:  1274
Name:  ? Tp57577_TGAC_v2_gene2408 Secondary Identifier:  ? PAC:35972504
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2408 0.5kb upstream 0.5kb upstream 2685 true Tp57577_TGAC_v2_LG2: 12494841-12497525 Trifolium pratense
Tp57577_TGAC_v2_gene2408 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 12497026-12497525 Trifolium pratense
Tp57577_TGAC_v2_gene2408 0.5kb downstream 0.5kb downstream 2685 true Tp57577_TGAC_v2_LG2: 12494341-12497025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 12494341-12494840 Trifolium pratense
Tp57577_TGAC_v2_gene2408 1.0kb upstream 1.0kb upstream 3185 true Tp57577_TGAC_v2_LG2: 12494841-12498025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 12497026-12498025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 1.0kb downstream 1.0kb downstream 3185 true Tp57577_TGAC_v2_LG2: 12493841-12497025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 12493841-12494840 Trifolium pratense
Tp57577_TGAC_v2_gene2408 2.0kb upstream 2.0kb upstream 4185 true Tp57577_TGAC_v2_LG2: 12494841-12499025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 12497026-12499025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 2.0kb downstream 2.0kb downstream 4185 true Tp57577_TGAC_v2_LG2: 12492841-12497025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 12492841-12494840 Trifolium pratense
Tp57577_TGAC_v2_gene2408 5.0kb upstream 5.0kb upstream 7185 true Tp57577_TGAC_v2_LG2: 12494841-12502025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 12497026-12502025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 5.0kb downstream 5.0kb downstream 7185 true Tp57577_TGAC_v2_LG2: 12489841-12497025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 12489841-12494840 Trifolium pratense
Tp57577_TGAC_v2_gene2408 10.0kb upstream 10.0kb upstream 12185 true Tp57577_TGAC_v2_LG2: 12494841-12507025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 12497026-12507025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 10.0kb downstream 10.0kb downstream 12185 true Tp57577_TGAC_v2_LG2: 12484841-12497025 Trifolium pratense
Tp57577_TGAC_v2_gene2408 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 12484841-12494840 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311985 5265 Fabidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain