Gene : Tp57577_TGAC_v2_gene25178 T. pratense v2
Defline:  (1 of 1) K03942 - NADH dehydrogenase (ubiquinone) flavoprotein 1 (NDUFV1) Genomic Order:  26
Name:  ? Tp57577_TGAC_v2_gene25178 Secondary Identifier:  ? PAC:35961424
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-3781 Trifolium pratense pathologic  
Tpratense PWY-4302 Trifolium pratense pathologic  
Tpratense PWY-5083 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25178 0.5kb upstream 0.5kb upstream 4163 true Tp57577_TGAC_v2_scaf_174: 204593-208755 Trifolium pratense
Tp57577_TGAC_v2_gene25178 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_174: 208256-208755 Trifolium pratense
Tp57577_TGAC_v2_gene25178 0.5kb downstream 0.5kb downstream 4163 true Tp57577_TGAC_v2_scaf_174: 204093-208255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_174: 204093-204592 Trifolium pratense
Tp57577_TGAC_v2_gene25178 1.0kb upstream 1.0kb upstream 4663 true Tp57577_TGAC_v2_scaf_174: 204593-209255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_174: 208256-209255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 1.0kb downstream 1.0kb downstream 4663 true Tp57577_TGAC_v2_scaf_174: 203593-208255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_174: 203593-204592 Trifolium pratense
Tp57577_TGAC_v2_gene25178 2.0kb upstream 2.0kb upstream 5663 true Tp57577_TGAC_v2_scaf_174: 204593-210255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_174: 208256-210255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 2.0kb downstream 2.0kb downstream 5663 true Tp57577_TGAC_v2_scaf_174: 202593-208255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_174: 202593-204592 Trifolium pratense
Tp57577_TGAC_v2_gene25178 5.0kb upstream 5.0kb upstream 8663 true Tp57577_TGAC_v2_scaf_174: 204593-213255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_174: 208256-213255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 5.0kb downstream 5.0kb downstream 8663 true Tp57577_TGAC_v2_scaf_174: 199593-208255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_174: 199593-204592 Trifolium pratense
Tp57577_TGAC_v2_gene25178 10.0kb upstream 10.0kb upstream 13663 true Tp57577_TGAC_v2_scaf_174: 204593-218255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_174: 208256-218255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 10.0kb downstream 10.0kb downstream 13663 true Tp57577_TGAC_v2_scaf_174: 194593-208255 Trifolium pratense
Tp57577_TGAC_v2_gene25178 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_174: 194593-204592 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301646 5265 Fabidae View MSA
124064570 5270 Rosid View MSA
123748716 5271 Pentapetalae View MSA
122786089 5272 Eudicot View MSA
122048540 5273 Angiosperm View MSA
121346586 5274 Embryophyte View MSA
123424028 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain