Gene : Tp57577_TGAC_v2_gene25139 T. pratense v2
Defline:  (1 of 1) PTHR23416:SF63 - SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  1357
Name:  ? Tp57577_TGAC_v2_gene25139 Secondary Identifier:  ? PAC:35972618
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CYSTSYN-PWY Trifolium pratense pathologic  
Tpratense PWY-6936 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25139 0.5kb upstream 0.5kb upstream 5010 true Tp57577_TGAC_v2_LG2: 13094408-13099417 Trifolium pratense
Tp57577_TGAC_v2_gene25139 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 13094408-13094907 Trifolium pratense
Tp57577_TGAC_v2_gene25139 0.5kb downstream 0.5kb downstream 5010 true Tp57577_TGAC_v2_LG2: 13094908-13099917 Trifolium pratense
Tp57577_TGAC_v2_gene25139 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 13099418-13099917 Trifolium pratense
Tp57577_TGAC_v2_gene25139 1.0kb upstream 1.0kb upstream 5510 true Tp57577_TGAC_v2_LG2: 13093908-13099417 Trifolium pratense
Tp57577_TGAC_v2_gene25139 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 13093908-13094907 Trifolium pratense
Tp57577_TGAC_v2_gene25139 1.0kb downstream 1.0kb downstream 5510 true Tp57577_TGAC_v2_LG2: 13094908-13100417 Trifolium pratense
Tp57577_TGAC_v2_gene25139 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 13099418-13100417 Trifolium pratense
Tp57577_TGAC_v2_gene25139 2.0kb upstream 2.0kb upstream 6510 true Tp57577_TGAC_v2_LG2: 13092908-13099417 Trifolium pratense
Tp57577_TGAC_v2_gene25139 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 13092908-13094907 Trifolium pratense
Tp57577_TGAC_v2_gene25139 2.0kb downstream 2.0kb downstream 6510 true Tp57577_TGAC_v2_LG2: 13094908-13101417 Trifolium pratense
Tp57577_TGAC_v2_gene25139 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 13099418-13101417 Trifolium pratense
Tp57577_TGAC_v2_gene25139 5.0kb upstream 5.0kb upstream 9510 true Tp57577_TGAC_v2_LG2: 13089908-13099417 Trifolium pratense
Tp57577_TGAC_v2_gene25139 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 13089908-13094907 Trifolium pratense
Tp57577_TGAC_v2_gene25139 5.0kb downstream 5.0kb downstream 9510 true Tp57577_TGAC_v2_LG2: 13094908-13104417 Trifolium pratense
Tp57577_TGAC_v2_gene25139 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 13099418-13104417 Trifolium pratense
Tp57577_TGAC_v2_gene25139 10.0kb upstream 10.0kb upstream 14510 true Tp57577_TGAC_v2_LG2: 13084908-13099417 Trifolium pratense
Tp57577_TGAC_v2_gene25139 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 13084908-13094907 Trifolium pratense
Tp57577_TGAC_v2_gene25139 10.0kb downstream 10.0kb downstream 14510 true Tp57577_TGAC_v2_LG2: 13094908-13109417 Trifolium pratense
Tp57577_TGAC_v2_gene25139 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 13099418-13109417 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304513 5265 Fabidae View MSA
124063279 5270 Rosid View MSA
123743402 5271 Pentapetalae View MSA
122788102 5272 Eudicot View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain