Gene : Tp57577_TGAC_v2_gene25131 T. pratense v2
Defline:  (1 of 2) 2.6.1.52 - Phosphoserine transaminase / PSAT Genomic Order:  1359
Name:  ? Tp57577_TGAC_v2_gene25131 Secondary Identifier:  ? PAC:35970406
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense SER-GLYSYN-PWY Trifolium pratense pathologic  
Tpratense SERSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25131 0.5kb upstream 0.5kb upstream 5439 true Tp57577_TGAC_v2_LG2: 13112409-13117847 Trifolium pratense
Tp57577_TGAC_v2_gene25131 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 13117348-13117847 Trifolium pratense
Tp57577_TGAC_v2_gene25131 0.5kb downstream 0.5kb downstream 5439 true Tp57577_TGAC_v2_LG2: 13111909-13117347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 13111909-13112408 Trifolium pratense
Tp57577_TGAC_v2_gene25131 1.0kb upstream 1.0kb upstream 5939 true Tp57577_TGAC_v2_LG2: 13112409-13118347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 13117348-13118347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 1.0kb downstream 1.0kb downstream 5939 true Tp57577_TGAC_v2_LG2: 13111409-13117347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 13111409-13112408 Trifolium pratense
Tp57577_TGAC_v2_gene25131 2.0kb upstream 2.0kb upstream 6939 true Tp57577_TGAC_v2_LG2: 13112409-13119347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 13117348-13119347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 2.0kb downstream 2.0kb downstream 6939 true Tp57577_TGAC_v2_LG2: 13110409-13117347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 13110409-13112408 Trifolium pratense
Tp57577_TGAC_v2_gene25131 5.0kb upstream 5.0kb upstream 9939 true Tp57577_TGAC_v2_LG2: 13112409-13122347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 13117348-13122347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 5.0kb downstream 5.0kb downstream 9939 true Tp57577_TGAC_v2_LG2: 13107409-13117347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 13107409-13112408 Trifolium pratense
Tp57577_TGAC_v2_gene25131 10.0kb upstream 10.0kb upstream 14939 true Tp57577_TGAC_v2_LG2: 13112409-13127347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 13117348-13127347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 10.0kb downstream 10.0kb downstream 14939 true Tp57577_TGAC_v2_LG2: 13102409-13117347 Trifolium pratense
Tp57577_TGAC_v2_gene25131 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 13102409-13112408 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307465 5265 Fabidae View MSA
124074701 5270 Rosid View MSA
123739926 5271 Pentapetalae View MSA
122788097 5272 Eudicot View MSA
122043165 5273 Angiosperm View MSA
121346366 5274 Embryophyte View MSA
123424895 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain