Gene : Tp57577_TGAC_v2_gene25125 T. pratense v2
Defline:  (1 of 2) PTHR11670:SF40 - ACONITATE HYDRATASE 1 Genomic Order:  1318
Name:  ? Tp57577_TGAC_v2_gene25125 Secondary Identifier:  ? PAC:35972042
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLYOXYLATE-BYPASS Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  
Tpratense PWY-561 Trifolium pratense pathologic  
Tpratense PWY-5690 Trifolium pratense pathologic  
Tpratense PWY-6549 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25125 0.5kb upstream 0.5kb upstream 5364 true Tp57577_TGAC_v2_LG2: 12825878-12831241 Trifolium pratense
Tp57577_TGAC_v2_gene25125 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 12825878-12826377 Trifolium pratense
Tp57577_TGAC_v2_gene25125 0.5kb downstream 0.5kb downstream 5364 true Tp57577_TGAC_v2_LG2: 12826378-12831741 Trifolium pratense
Tp57577_TGAC_v2_gene25125 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 12831242-12831741 Trifolium pratense
Tp57577_TGAC_v2_gene25125 1.0kb upstream 1.0kb upstream 5864 true Tp57577_TGAC_v2_LG2: 12825378-12831241 Trifolium pratense
Tp57577_TGAC_v2_gene25125 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 12825378-12826377 Trifolium pratense
Tp57577_TGAC_v2_gene25125 1.0kb downstream 1.0kb downstream 5864 true Tp57577_TGAC_v2_LG2: 12826378-12832241 Trifolium pratense
Tp57577_TGAC_v2_gene25125 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 12831242-12832241 Trifolium pratense
Tp57577_TGAC_v2_gene25125 2.0kb upstream 2.0kb upstream 6864 true Tp57577_TGAC_v2_LG2: 12824378-12831241 Trifolium pratense
Tp57577_TGAC_v2_gene25125 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 12824378-12826377 Trifolium pratense
Tp57577_TGAC_v2_gene25125 2.0kb downstream 2.0kb downstream 6864 true Tp57577_TGAC_v2_LG2: 12826378-12833241 Trifolium pratense
Tp57577_TGAC_v2_gene25125 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 12831242-12833241 Trifolium pratense
Tp57577_TGAC_v2_gene25125 5.0kb upstream 5.0kb upstream 9864 true Tp57577_TGAC_v2_LG2: 12821378-12831241 Trifolium pratense
Tp57577_TGAC_v2_gene25125 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 12821378-12826377 Trifolium pratense
Tp57577_TGAC_v2_gene25125 5.0kb downstream 5.0kb downstream 9864 true Tp57577_TGAC_v2_LG2: 12826378-12836241 Trifolium pratense
Tp57577_TGAC_v2_gene25125 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 12831242-12836241 Trifolium pratense
Tp57577_TGAC_v2_gene25125 10.0kb upstream 10.0kb upstream 14864 true Tp57577_TGAC_v2_LG2: 12816378-12831241 Trifolium pratense
Tp57577_TGAC_v2_gene25125 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 12816378-12826377 Trifolium pratense
Tp57577_TGAC_v2_gene25125 10.0kb downstream 10.0kb downstream 14864 true Tp57577_TGAC_v2_LG2: 12826378-12841241 Trifolium pratense
Tp57577_TGAC_v2_gene25125 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 12831242-12841241 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300043 5265 Fabidae View MSA
124069604 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain