Gene : Tp57577_TGAC_v2_gene25204 T. pratense v2
Defline:  (1 of 1) PTHR12358//PTHR12358:SF39 - SPHINGOSINE KINASE // SUBFAMILY NOT NAMED Genomic Order:  67
Name:  ? Tp57577_TGAC_v2_gene25204 Secondary Identifier:  ? PAC:35970932
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5129 Trifolium pratense pathologic  
Tpratense PWY-6483 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25204 0.5kb upstream 0.5kb upstream 8847 true Tp57577_TGAC_v2_LG2: 572371-581217 Trifolium pratense
Tp57577_TGAC_v2_gene25204 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 572371-572870 Trifolium pratense
Tp57577_TGAC_v2_gene25204 0.5kb downstream 0.5kb downstream 8847 true Tp57577_TGAC_v2_LG2: 572871-581717 Trifolium pratense
Tp57577_TGAC_v2_gene25204 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 581218-581717 Trifolium pratense
Tp57577_TGAC_v2_gene25204 1.0kb upstream 1.0kb upstream 9347 true Tp57577_TGAC_v2_LG2: 571871-581217 Trifolium pratense
Tp57577_TGAC_v2_gene25204 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 571871-572870 Trifolium pratense
Tp57577_TGAC_v2_gene25204 1.0kb downstream 1.0kb downstream 9347 true Tp57577_TGAC_v2_LG2: 572871-582217 Trifolium pratense
Tp57577_TGAC_v2_gene25204 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 581218-582217 Trifolium pratense
Tp57577_TGAC_v2_gene25204 2.0kb upstream 2.0kb upstream 10347 true Tp57577_TGAC_v2_LG2: 570871-581217 Trifolium pratense
Tp57577_TGAC_v2_gene25204 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 570871-572870 Trifolium pratense
Tp57577_TGAC_v2_gene25204 2.0kb downstream 2.0kb downstream 10347 true Tp57577_TGAC_v2_LG2: 572871-583217 Trifolium pratense
Tp57577_TGAC_v2_gene25204 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 581218-583217 Trifolium pratense
Tp57577_TGAC_v2_gene25204 5.0kb upstream 5.0kb upstream 13347 true Tp57577_TGAC_v2_LG2: 567871-581217 Trifolium pratense
Tp57577_TGAC_v2_gene25204 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 567871-572870 Trifolium pratense
Tp57577_TGAC_v2_gene25204 5.0kb downstream 5.0kb downstream 13347 true Tp57577_TGAC_v2_LG2: 572871-586217 Trifolium pratense
Tp57577_TGAC_v2_gene25204 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 581218-586217 Trifolium pratense
Tp57577_TGAC_v2_gene25204 10.0kb upstream 10.0kb upstream 18347 true Tp57577_TGAC_v2_LG2: 562871-581217 Trifolium pratense
Tp57577_TGAC_v2_gene25204 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 562871-572870 Trifolium pratense
Tp57577_TGAC_v2_gene25204 10.0kb downstream 10.0kb downstream 18347 true Tp57577_TGAC_v2_LG2: 572871-591217 Trifolium pratense
Tp57577_TGAC_v2_gene25204 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 581218-591217 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302965 5265 Fabidae View MSA
124074924 5270 Rosid View MSA
123752126 5271 Pentapetalae View MSA
122793643 5272 Eudicot View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain