Gene : Tp57577_TGAC_v2_gene25163 T. pratense v2
Defline:  (1 of 3) PTHR31008:SF0 - COP1-INTERACTING PROTEIN-LIKE PROTEIN Genomic Order:  8
Name:  ? Tp57577_TGAC_v2_gene25163 Secondary Identifier:  ? PAC:35961405
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25163 0.5kb upstream 0.5kb upstream 8127 true Tp57577_TGAC_v2_scaf_174: 71636-79762 Trifolium pratense
Tp57577_TGAC_v2_gene25163 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_174: 71636-72135 Trifolium pratense
Tp57577_TGAC_v2_gene25163 0.5kb downstream 0.5kb downstream 8127 true Tp57577_TGAC_v2_scaf_174: 72136-80262 Trifolium pratense
Tp57577_TGAC_v2_gene25163 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_174: 79763-80262 Trifolium pratense
Tp57577_TGAC_v2_gene25163 1.0kb upstream 1.0kb upstream 8627 true Tp57577_TGAC_v2_scaf_174: 71136-79762 Trifolium pratense
Tp57577_TGAC_v2_gene25163 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_174: 71136-72135 Trifolium pratense
Tp57577_TGAC_v2_gene25163 1.0kb downstream 1.0kb downstream 8627 true Tp57577_TGAC_v2_scaf_174: 72136-80762 Trifolium pratense
Tp57577_TGAC_v2_gene25163 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_174: 79763-80762 Trifolium pratense
Tp57577_TGAC_v2_gene25163 2.0kb upstream 2.0kb upstream 9627 true Tp57577_TGAC_v2_scaf_174: 70136-79762 Trifolium pratense
Tp57577_TGAC_v2_gene25163 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_174: 70136-72135 Trifolium pratense
Tp57577_TGAC_v2_gene25163 2.0kb downstream 2.0kb downstream 9627 true Tp57577_TGAC_v2_scaf_174: 72136-81762 Trifolium pratense
Tp57577_TGAC_v2_gene25163 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_174: 79763-81762 Trifolium pratense
Tp57577_TGAC_v2_gene25163 5.0kb upstream 5.0kb upstream 12627 true Tp57577_TGAC_v2_scaf_174: 67136-79762 Trifolium pratense
Tp57577_TGAC_v2_gene25163 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_174: 67136-72135 Trifolium pratense
Tp57577_TGAC_v2_gene25163 5.0kb downstream 5.0kb downstream 12627 true Tp57577_TGAC_v2_scaf_174: 72136-84762 Trifolium pratense
Tp57577_TGAC_v2_gene25163 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_174: 79763-84762 Trifolium pratense
Tp57577_TGAC_v2_gene25163 10.0kb upstream 10.0kb upstream 17627 true Tp57577_TGAC_v2_scaf_174: 62136-79762 Trifolium pratense
Tp57577_TGAC_v2_gene25163 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_174: 62136-72135 Trifolium pratense
Tp57577_TGAC_v2_gene25163 10.0kb downstream 10.0kb downstream 17627 true Tp57577_TGAC_v2_scaf_174: 72136-89762 Trifolium pratense
Tp57577_TGAC_v2_gene25163 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_174: 79763-89762 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295466 5265 Fabidae View MSA
124035070 5270 Rosid View MSA
123744546 5271 Pentapetalae View MSA
122797843 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain