Gene : Tp57577_TGAC_v2_gene32798 T. pratense v2
Defline:  (1 of 5) K01674 - carbonic anhydrase (cah) Genomic Order:  26
Name:  ? Tp57577_TGAC_v2_gene32798 Secondary Identifier:  ? PAC:35992243
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CYANCAT-PWY Trifolium pratense pathologic  
Tpratense PWY-241 Trifolium pratense pathologic  
Tpratense PWY-7115 Trifolium pratense pathologic  
Tpratense PWY-7117 Trifolium pratense pathologic  
Tpratense PWYQT-4429 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene32798 0.5kb upstream 0.5kb upstream 3976 true Tp57577_TGAC_v2_scaf_186: 174686-178661 Trifolium pratense
Tp57577_TGAC_v2_gene32798 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_186: 174686-175185 Trifolium pratense
Tp57577_TGAC_v2_gene32798 0.5kb downstream 0.5kb downstream 3976 true Tp57577_TGAC_v2_scaf_186: 175186-179161 Trifolium pratense
Tp57577_TGAC_v2_gene32798 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_186: 178662-179161 Trifolium pratense
Tp57577_TGAC_v2_gene32798 1.0kb upstream 1.0kb upstream 4476 true Tp57577_TGAC_v2_scaf_186: 174186-178661 Trifolium pratense
Tp57577_TGAC_v2_gene32798 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_186: 174186-175185 Trifolium pratense
Tp57577_TGAC_v2_gene32798 1.0kb downstream 1.0kb downstream 4476 true Tp57577_TGAC_v2_scaf_186: 175186-179661 Trifolium pratense
Tp57577_TGAC_v2_gene32798 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_186: 178662-179661 Trifolium pratense
Tp57577_TGAC_v2_gene32798 2.0kb upstream 2.0kb upstream 5476 true Tp57577_TGAC_v2_scaf_186: 173186-178661 Trifolium pratense
Tp57577_TGAC_v2_gene32798 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_186: 173186-175185 Trifolium pratense
Tp57577_TGAC_v2_gene32798 2.0kb downstream 2.0kb downstream 5476 true Tp57577_TGAC_v2_scaf_186: 175186-180661 Trifolium pratense
Tp57577_TGAC_v2_gene32798 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_186: 178662-180661 Trifolium pratense
Tp57577_TGAC_v2_gene32798 5.0kb upstream 5.0kb upstream 8476 true Tp57577_TGAC_v2_scaf_186: 170186-178661 Trifolium pratense
Tp57577_TGAC_v2_gene32798 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_186: 170186-175185 Trifolium pratense
Tp57577_TGAC_v2_gene32798 5.0kb downstream 5.0kb downstream 8476 true Tp57577_TGAC_v2_scaf_186: 175186-183661 Trifolium pratense
Tp57577_TGAC_v2_gene32798 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_186: 178662-183661 Trifolium pratense
Tp57577_TGAC_v2_gene32798 10.0kb upstream 10.0kb upstream 13476 true Tp57577_TGAC_v2_scaf_186: 165186-178661 Trifolium pratense
Tp57577_TGAC_v2_gene32798 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_186: 165186-175185 Trifolium pratense
Tp57577_TGAC_v2_gene32798 10.0kb downstream 10.0kb downstream 13476 true Tp57577_TGAC_v2_scaf_186: 175186-188661 Trifolium pratense
Tp57577_TGAC_v2_gene32798 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_186: 178662-188661 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297584 5265 Fabidae View MSA
124067085 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain