Gene : Tp57577_TGAC_v2_gene5956 T. pratense v2
Defline:  (1 of 1) K08247 - methionine S-methyltransferase (E2.1.1.12) Genomic Order:  2383
Name:  ? Tp57577_TGAC_v2_gene5956 Secondary Identifier:  ? PAC:35970372
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5441 Trifolium pratense pathologic  
Tpratense PWY-6054 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5956 0.5kb upstream 0.5kb upstream 14962 true Tp57577_TGAC_v2_LG2: 22438515-22453476 Trifolium pratense
Tp57577_TGAC_v2_gene5956 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 22452977-22453476 Trifolium pratense
Tp57577_TGAC_v2_gene5956 0.5kb downstream 0.5kb downstream 14962 true Tp57577_TGAC_v2_LG2: 22438015-22452976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 22438015-22438514 Trifolium pratense
Tp57577_TGAC_v2_gene5956 1.0kb upstream 1.0kb upstream 15462 true Tp57577_TGAC_v2_LG2: 22438515-22453976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 22452977-22453976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 1.0kb downstream 1.0kb downstream 15462 true Tp57577_TGAC_v2_LG2: 22437515-22452976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 22437515-22438514 Trifolium pratense
Tp57577_TGAC_v2_gene5956 2.0kb upstream 2.0kb upstream 16462 true Tp57577_TGAC_v2_LG2: 22438515-22454976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 22452977-22454976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 2.0kb downstream 2.0kb downstream 16462 true Tp57577_TGAC_v2_LG2: 22436515-22452976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 22436515-22438514 Trifolium pratense
Tp57577_TGAC_v2_gene5956 5.0kb upstream 5.0kb upstream 19462 true Tp57577_TGAC_v2_LG2: 22438515-22457976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 22452977-22457976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 5.0kb downstream 5.0kb downstream 19462 true Tp57577_TGAC_v2_LG2: 22433515-22452976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 22433515-22438514 Trifolium pratense
Tp57577_TGAC_v2_gene5956 10.0kb upstream 10.0kb upstream 24462 true Tp57577_TGAC_v2_LG2: 22438515-22462976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 22452977-22462976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 10.0kb downstream 10.0kb downstream 24462 true Tp57577_TGAC_v2_LG2: 22428515-22452976 Trifolium pratense
Tp57577_TGAC_v2_gene5956 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 22428515-22438514 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308216 5265 Fabidae View MSA
124060886 5270 Rosid View MSA
123740087 5271 Pentapetalae View MSA
122793116 5272 Eudicot View MSA
122045500 5273 Angiosperm View MSA
121345934 5274 Embryophyte View MSA
123380293 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain