Gene : Tp57577_TGAC_v2_gene32816 T. pratense v2
Defline:  (1 of 28) PTHR11165 - SKP1 Genomic Order:  11
Name:  ? Tp57577_TGAC_v2_gene32816 Secondary Identifier:  ? PAC:35992206
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene32816 0.5kb upstream 0.5kb upstream 1299 true Tp57577_TGAC_v2_scaf_186: 82536-83834 Trifolium pratense
Tp57577_TGAC_v2_gene32816 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_186: 82536-83035 Trifolium pratense
Tp57577_TGAC_v2_gene32816 0.5kb downstream 0.5kb downstream 1299 true Tp57577_TGAC_v2_scaf_186: 83036-84334 Trifolium pratense
Tp57577_TGAC_v2_gene32816 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_186: 83835-84334 Trifolium pratense
Tp57577_TGAC_v2_gene32816 1.0kb upstream 1.0kb upstream 1799 true Tp57577_TGAC_v2_scaf_186: 82036-83834 Trifolium pratense
Tp57577_TGAC_v2_gene32816 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_186: 82036-83035 Trifolium pratense
Tp57577_TGAC_v2_gene32816 1.0kb downstream 1.0kb downstream 1799 true Tp57577_TGAC_v2_scaf_186: 83036-84834 Trifolium pratense
Tp57577_TGAC_v2_gene32816 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_186: 83835-84834 Trifolium pratense
Tp57577_TGAC_v2_gene32816 2.0kb upstream 2.0kb upstream 2799 true Tp57577_TGAC_v2_scaf_186: 81036-83834 Trifolium pratense
Tp57577_TGAC_v2_gene32816 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_186: 81036-83035 Trifolium pratense
Tp57577_TGAC_v2_gene32816 2.0kb downstream 2.0kb downstream 2799 true Tp57577_TGAC_v2_scaf_186: 83036-85834 Trifolium pratense
Tp57577_TGAC_v2_gene32816 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_186: 83835-85834 Trifolium pratense
Tp57577_TGAC_v2_gene32816 5.0kb upstream 5.0kb upstream 5799 true Tp57577_TGAC_v2_scaf_186: 78036-83834 Trifolium pratense
Tp57577_TGAC_v2_gene32816 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_186: 78036-83035 Trifolium pratense
Tp57577_TGAC_v2_gene32816 5.0kb downstream 5.0kb downstream 5799 true Tp57577_TGAC_v2_scaf_186: 83036-88834 Trifolium pratense
Tp57577_TGAC_v2_gene32816 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_186: 83835-88834 Trifolium pratense
Tp57577_TGAC_v2_gene32816 10.0kb upstream 10.0kb upstream 10799 true Tp57577_TGAC_v2_scaf_186: 73036-83834 Trifolium pratense
Tp57577_TGAC_v2_gene32816 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_186: 73036-83035 Trifolium pratense
Tp57577_TGAC_v2_gene32816 10.0kb downstream 10.0kb downstream 10799 true Tp57577_TGAC_v2_scaf_186: 83036-93834 Trifolium pratense
Tp57577_TGAC_v2_gene32816 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_186: 83835-93834 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315538 5265 Fabidae View MSA
124075311 5270 Rosid View MSA
123744391 5271 Pentapetalae View MSA
122796189 5272 Eudicot View MSA
122048755 5273 Angiosperm View MSA
121348588 5274 Embryophyte View MSA
123428431 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain