Gene : Tp57577_TGAC_v2_gene6700 T. pratense v2

Defline:  (1 of 1) PTHR31071:SF9 - INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-LIKE PROTEIN Genomic Order:  3485
Name:  ? Tp57577_TGAC_v2_gene6700 Secondary Identifier:  ? PAC:35972412

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6700 0.5kb upstream 0.5kb upstream 5322 true Tp57577_TGAC_v2_LG2: 30943991-30949312 Trifolium pratense
Tp57577_TGAC_v2_gene6700 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 30943991-30944490 Trifolium pratense
Tp57577_TGAC_v2_gene6700 0.5kb downstream 0.5kb downstream 5322 true Tp57577_TGAC_v2_LG2: 30944491-30949812 Trifolium pratense
Tp57577_TGAC_v2_gene6700 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 30949313-30949812 Trifolium pratense
Tp57577_TGAC_v2_gene6700 1.0kb upstream 1.0kb upstream 5822 true Tp57577_TGAC_v2_LG2: 30943491-30949312 Trifolium pratense
Tp57577_TGAC_v2_gene6700 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 30943491-30944490 Trifolium pratense
Tp57577_TGAC_v2_gene6700 1.0kb downstream 1.0kb downstream 5822 true Tp57577_TGAC_v2_LG2: 30944491-30950312 Trifolium pratense
Tp57577_TGAC_v2_gene6700 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 30949313-30950312 Trifolium pratense
Tp57577_TGAC_v2_gene6700 2.0kb upstream 2.0kb upstream 6822 true Tp57577_TGAC_v2_LG2: 30942491-30949312 Trifolium pratense
Tp57577_TGAC_v2_gene6700 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 30942491-30944490 Trifolium pratense
Tp57577_TGAC_v2_gene6700 2.0kb downstream 2.0kb downstream 6822 true Tp57577_TGAC_v2_LG2: 30944491-30951312 Trifolium pratense
Tp57577_TGAC_v2_gene6700 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 30949313-30951312 Trifolium pratense
Tp57577_TGAC_v2_gene6700 5.0kb upstream 5.0kb upstream 9822 true Tp57577_TGAC_v2_LG2: 30939491-30949312 Trifolium pratense
Tp57577_TGAC_v2_gene6700 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 30939491-30944490 Trifolium pratense
Tp57577_TGAC_v2_gene6700 5.0kb downstream 5.0kb downstream 9822 true Tp57577_TGAC_v2_LG2: 30944491-30954312 Trifolium pratense
Tp57577_TGAC_v2_gene6700 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 30949313-30954312 Trifolium pratense
Tp57577_TGAC_v2_gene6700 10.0kb upstream 10.0kb upstream 14822 true Tp57577_TGAC_v2_LG2: 30934491-30949312 Trifolium pratense
Tp57577_TGAC_v2_gene6700 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 30934491-30944490 Trifolium pratense
Tp57577_TGAC_v2_gene6700 10.0kb downstream 10.0kb downstream 14822 true Tp57577_TGAC_v2_LG2: 30944491-30959312 Trifolium pratense
Tp57577_TGAC_v2_gene6700 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 30949313-30959312 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301898 5265 Fabidae View MSA
124072871 5270 Rosid View MSA
123736575 5271 Pentapetalae View MSA
122797498 5272 Eudicot View MSA
122044970 5273 Angiosperm View MSA
121310375 5274 Embryophyte View MSA
123347876 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain