Gene : Tp57577_TGAC_v2_gene32717 T. pratense v2
Defline:  (1 of 2) PTHR10426//PTHR10426:SF29 - STRICTOSIDINE SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  36
Name:  ? Tp57577_TGAC_v2_gene32717 Secondary Identifier:  ? PAC:35986105
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene32717 0.5kb upstream 0.5kb upstream 4337 true Tp57577_TGAC_v2_scaf_188: 352459-356795 Trifolium pratense
Tp57577_TGAC_v2_gene32717 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_188: 356296-356795 Trifolium pratense
Tp57577_TGAC_v2_gene32717 0.5kb downstream 0.5kb downstream 4337 true Tp57577_TGAC_v2_scaf_188: 351959-356295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_188: 351959-352458 Trifolium pratense
Tp57577_TGAC_v2_gene32717 1.0kb upstream 1.0kb upstream 4837 true Tp57577_TGAC_v2_scaf_188: 352459-357295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_188: 356296-357295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 1.0kb downstream 1.0kb downstream 4837 true Tp57577_TGAC_v2_scaf_188: 351459-356295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_188: 351459-352458 Trifolium pratense
Tp57577_TGAC_v2_gene32717 2.0kb upstream 2.0kb upstream 5837 true Tp57577_TGAC_v2_scaf_188: 352459-358295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_188: 356296-358295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 2.0kb downstream 2.0kb downstream 5837 true Tp57577_TGAC_v2_scaf_188: 350459-356295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_188: 350459-352458 Trifolium pratense
Tp57577_TGAC_v2_gene32717 5.0kb upstream 5.0kb upstream 8837 true Tp57577_TGAC_v2_scaf_188: 352459-361295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_188: 356296-361295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 5.0kb downstream 5.0kb downstream 8837 true Tp57577_TGAC_v2_scaf_188: 347459-356295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_188: 347459-352458 Trifolium pratense
Tp57577_TGAC_v2_gene32717 10.0kb upstream 10.0kb upstream 13837 true Tp57577_TGAC_v2_scaf_188: 352459-366295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_188: 356296-366295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 10.0kb downstream 10.0kb downstream 13837 true Tp57577_TGAC_v2_scaf_188: 342459-356295 Trifolium pratense
Tp57577_TGAC_v2_gene32717 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_188: 342459-352458 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305822 5265 Fabidae View MSA
124066148 5270 Rosid View MSA
123745070 5271 Pentapetalae View MSA
122791794 5272 Eudicot View MSA
122047810 5273 Angiosperm View MSA
121350347 5274 Embryophyte View MSA
123427583 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain